Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq453 333 8e-89 seq145 129 2e-27 >seq453 Length=77385 Score = 333 bits (368), Expect = 8e-89 Identities = 281/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 53176 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 53117 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 53116 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 53057 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 53056 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 52997 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | || ||||| |||||||||| || ||| Sbjct 52996 AGGCCTACGGGTCCTGAACTTCTTTTCCCAGAGAAGAAGCAATGACGGTATCTGGGGAAT 52937 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 52936 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 52877 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 52876 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 52835 >seq145 Length=10181 Score = 129 bits (142), Expect = 2e-27 Identities = 204/285 (72%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 195 ACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACA 254 |||||||||| || ||| ||| | || |||||| || | |||||| || || |||||| Sbjct 9259 ACCAAGGCGAGGAGCAGGAGCGGGCC-GAGAGGAGGAGCAGCCACACGGGGACGGAGACA 9317 Query 255 CGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGA 314 ||| ||| || || |||||||||||||| |||||| | ||| |||| |||||| || Sbjct 9318 CGGCCCAGACGCCGACGGGAGGCAGCAG-GGGGAAGGGGCCGCAAGGGGCGAAAGCCGGA 9376 Query 315 TGCAGCAACGCCGC-GTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGA 373 | ||||| ||||| | ||| || ||||||| |||| | || | | | || || Sbjct 9377 CGGAGCAAGGCCGCGGGGAGGGA-GAAGGCCGACGGGGCCGGAACGGCGGGGCCCAGAGA 9435 Query 374 AGA--TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGT 431 ||| || ||||| | | ||| ||||| |||| ||| | |||||||||||||| Sbjct 9436 AGAAGCAAGGACGGGAGCGGGGGAAGAAGCAGCGGCGAACGCGGGGCCAGCAGCCGCGGG 9495 Query 432 AATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAG 476 || || ||| ||| |||| | |||||| | |||||| |||| Sbjct 9496 AAGACAGAGGAGGCAAGCGGGAGCCGGAAGGA-GGGGGCGGAAAG 9539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497589441920