Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq453 277 4e-72 >seq453 Length=77385 Score = 277 bits (306), Expect = 4e-72 Identities = 306/405 (76%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 52944 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 52885 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 52884 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 52825 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 52824 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTTGAGTACGGTAGGGGCA 52765 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||||||||||||||||| || | | |||||||| |||||| Sbjct 52764 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 52705 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| ||||||| ||||||| || ||||| Sbjct 52704 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 52645 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| ||||||||||||| |||||||| | | | ||| || | Sbjct 52644 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 52586 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 52585 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 52541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203191517440