Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq481 199 3e-46 >seq481 Length=6868915 Score = 199 bits (220), Expect = 3e-46 Identities = 380/548 (69%), Gaps = 15/548 (3%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| ||||| || |||||||||| ||| || ||||| | || ||||| Sbjct 948805 ATGTACAAGAAGGCCGAAGCATCTTTCTGGACGGCGGAAGAAGTCGACCTATCGCAAGAC 948864 Query 61156 ATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 ||||||||| | | | ||| ||| || | ||| ||||| ||||| || | || Sbjct 948865 GGTCGCGACTGGGAGAATCTCAACGA-CGGCGAGCGACACTTCATCAAACACGTCCTCGC 948923 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT-TTATTGGAACGTTTCGCGCAGG 61273 ||||| ||||| || ||||| |||||| |||||| || | | ||| | | | Sbjct 948924 TTTCTTCGCCGCCTCAGACGGAATCGTCCTGGAGAATCTTGCTTCCAGGTT-CATGTCCG 948982 Query 61274 AGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCC 61333 | || ||||| |||||||||||| |||||| || |||||||| || || ||||| ||| Sbjct 948983 ATGTACAAGTCTCGGAGGCGCGTGCTTTCTATGGATTCCAGATCGCGATCGAGAACATCC 949042 Query 61334 ACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAAC 61393 ||||||||||||||||| | ||| ||||||||||||||| ||| || | || | Sbjct 949043 ACTCGGAGATGTACAGTCTCCTCCTCGATACGTACATCAAGGACAACAAAGAGAGAGACC 949102 Query 61394 GATTGTTCAATGCCATCGAGACGATACC-GGCG--GTGAAGCGGAAAGCGGATTGGGCCT 61450 | ||| || ||||| || || || ||| | ||| |||||| | |||||| Sbjct 949103 ATCTCTTCCGAGCAATCGAAACCATCCCTTGCGTCGCGAA---GAAAGCACAGTGGGCCA 949159 Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | || |||||| | | | | || || | ||| || | | || || || | Sbjct 949160 TGAAGTGGATCGACGG---ATCTCAGACCTTCGCCGAAAGAATCATCGCTTTCGCCTGCG 949216 Query 61511 TCGAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 |||| ||| | || ||| || | | | || | | ||||| ||| ||||||| || || Sbjct 949217 TCGAAGGTATCTTCTTCTCCGGTAGCTTCTG-CTCGATCTTCTGGCTGAAGAAGCGAGGG 949275 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || |||||||| ||| |||||||| || || || || ||| | || || Sbjct 949276 CTCATGCCGGGATTGACCTTCTCCAACGAGTTGATCTCTCGAGATGAAGGCTTACACTGC 949335 Query 61630 GATTTTGC 61637 ||||| || Sbjct 949336 GATTTCGC 949343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564584021200