Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq13509 233 4e-59
>seq13509
Length=41131
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 23989 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 23930
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| ||||| | ||| || ||||||||
Sbjct 23929 GGGATAACATCATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 23871
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 23870 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 23811
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 23810 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 23752
Query 311 GTTAGGGG 318
||| ||||
Sbjct 23751 GTTGGGGG 23744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915016273600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |