Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq7305 87.8 2e-15
seq17268 84.2 2e-14
>seq7305
Length=44007
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 21675 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 21734
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 21735 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 21780
>seq17268
Length=15521
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| || ||||| ||
Sbjct 13398 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTTCGCAAAGTCGT 13339
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 13338 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 13293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476707273575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |