Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq13509 297 4e-78
>seq13509
Length=41131
Score = 297 bits (328), Expect = 4e-78
Identities = 225/263 (86%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 67 GCCGGCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||| |||||||||||||||||| | || || | | |||||||||||||||||||||||
Sbjct 23357 GCCAGCTTCTTAGAGGGACTATGGCCTTTTAGGCCACGGAAGTTTGAGGCAATAACAGGT 23298
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 23297 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTA 23238
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
|| ||||||||| ||| | ||| |||||| | ||| | ||||| ||||||||||
Sbjct 23237 TATAGCCTTGGCCGACAGGCCCGGGAAATCTT-TGAAATTTCATCGTGATGGGGATAGAT 23179
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
|||||||||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||
Sbjct 23178 CATTGCAATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGT 23119
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
||| |||||||||||||||||||
Sbjct 23118 TGACTACGTCCCTGCCCTTTGTA 23096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947009849600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |