Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corchorus_20capsularis_20[genbank_20GCA_5F001974805.1_202017-01-30] 16,522 sequences; 317,178,409 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2624 405 1e-110 seq2472 230 6e-58 seq2307 230 6e-58 seq1867 230 6e-58 seq2199 224 3e-56 seq1338 224 3e-56 seq1962 199 1e-48 seq2143 192 2e-46 seq2598 187 6e-45 seq15038 161 3e-37 seq2507 140 8e-31 seq2212 132 1e-28 seq4752 129 2e-27 seq2004 125 2e-26 seq4592 123 6e-26 seq4606 91.5 4e-16 seq12142 87.8 5e-15 >seq2624 Length=1002 Score = 405 bits (448), Expect = 1e-110 Identities = 246/259 (95%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 744 TACCGGAAGAATAAGGACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTCC 803 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 804 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGCAAGACCGATGT 863 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCAC-GACTAGAGTGTGTCAG 181 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct 864 GAAATCCCCGGGCTTAACCTGGGAATTGCATTGGTGACTGCACGGCCTAGAGTGTGTCAG 923 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| Sbjct 924 AGGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATG 983 Query 242 GCGAAGGCAGCCCCCTGGG 260 ||||||||||||||||||| Sbjct 984 GCGAAGGCAGCCCCCTGGG 1002 >seq2472 Length=1046 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 845 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 786 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 785 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 726 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 725 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 666 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 665 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 606 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 605 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 546 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 545 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 486 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 485 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 437 >seq2307 Length=1051 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 74 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 133 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 134 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 193 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 194 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 253 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 254 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 313 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 314 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 373 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 374 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 433 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 434 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 482 >seq1867 Length=1153 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 1102 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 1043 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 1042 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 983 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 982 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 923 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 922 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 863 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 862 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 803 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 802 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 743 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 742 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 694 >seq2199 Length=1397 Score = 224 bits (248), Expect = 3e-56 Identities = 297/410 (72%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 715 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 656 Query 63 AAGCGTTAATCGGAATTACTGGG-CGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 |||||||| |||||| | |||| |||||||||| | ||| || | | |||| | | | Sbjct 655 AAGCGTTATCCGGAATGATTGGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCG 596 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 595 TCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAG 536 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| | Sbjct 535 GGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACG 476 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| ||| | ||||| |||||||| || | |||||||| ||||||| || Sbjct 475 GCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATG 416 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 ||||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 415 GGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCG 356 Query 362 TTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 355 ACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 306 >seq1338 Length=1085 Score = 224 bits (248), Expect = 3e-56 Identities = 133/139 (96%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 139 TACCGGAAGAATAAGGACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTCC 80 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 79 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGCAAGACCGATGT 20 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||||||||||||||| Sbjct 19 GAAATCCCCGGGCTTAACC 1 >seq1962 Length=1043 Score = 199 bits (220), Expect = 1e-48 Identities = 238/322 (74%), Gaps = 1/322 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAA-TACGTAGGGTG 61 || ||| ||||||||| ||||||||| ||||||||||||||||||| ||| ||| || Sbjct 323 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAATACAGAGGATG 264 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||||| | |||||||||||||| | ||| || | | |||| | | | Sbjct 263 CAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCG 204 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 203 TCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAG 144 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| | Sbjct 143 GGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACG 84 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| ||| | ||||| |||||||| || | |||||||| ||||||| || Sbjct 83 GCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATG 24 Query 302 GGATTAGATACCCTGGTAGTCC 323 ||||||||||||| ||||||| Sbjct 23 GGATTAGATACCCCAGTAGTCC 2 >seq2143 Length=1235 Score = 192 bits (212), Expect = 2e-46 Identities = 231/313 (74%), Gaps = 1/313 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 920 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 979 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 980 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 1039 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGC-ATTTGTGACTGCACGACTAGAGTGTGTCAG 181 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 1040 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGGAAACTACCAAGCTGGAGTACGGTAG 1099 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| | Sbjct 1100 GGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACG 1159 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| ||| | ||||| |||||||| || | |||||||| ||||||| || Sbjct 1160 GCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATG 1219 Query 302 GGATTAGATACCC 314 ||||||||||||| Sbjct 1220 GGATTAGATACCC 1232 >seq2598 Length=1028 Score = 187 bits (206), Expect = 6e-45 Identities = 298/416 (72%), Gaps = 15/416 (4%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 577 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 636 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGG-CGGTTGTGTAAGACAGGTG 121 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | | Sbjct 637 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGGCTTTTTAAGTCCGCCG 696 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 697 TCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAG 756 Query 182 AGGGGGGTGGAATTCCACGT-GTAGCAGTG-AAATGCGTAGATATGTGGAGGAACACCAA 239 || | |||||| | || | ||| ||| ||||||||||| || | | ||||||||| Sbjct 757 GGGCAGAGGGAATTTCCGGTGGAAGCGGTGAAAATGCGTAGAGATCGGAAAGAACACCAA 816 Query 240 TGGCGAAGGCAGCCCCCT-GGGATAACACTGACGCT--CATGCACGAAAGCGTGGGGAGC 296 |||||| ||| | || ||| |||||||| || | |||||||| ||||||| Sbjct 817 CGGCGAAAGCACTCTGCTAGGGCCGACACTGACACTTGAGAGTACGAAAGCTAGGGGAGC 876 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTA---GTTGTTGG 353 || ||||||||||||| ||||||| ||| |||||||| |||| | | || Sbjct 877 GAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTAGTGC 936 Query 354 GGATTTACTTCCTTG--GTAAC-GTAGCTAACG-CGTGAAGTTGACCGCCTGGGGA 405 | || || || || || || |||||||||| ||| |||| ||||||||||| Sbjct 937 GTATCGAC--CCGTGCAGTGACTGTAGCTAACGACGTTAAGTATCCCGCCTGGGGA 990 >seq15038 Length=42480 Score = 161 bits (178), Expect = 3e-37 Identities = 199/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 5995 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 5936 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 5935 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 5876 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 5875 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 5816 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| || ||||||||||| || | | ||||||||| || Sbjct 5815 GGCAGAGGGAATTTCCGGTGGAGCGGTAAAATGCGTAGAGATCGGAAAGAACACCAACGG 5756 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCT 274 |||| ||| | ||||| |||||||| || Sbjct 5755 CGAAAGCACTCTGCTGGGCCGACACTGACACT 5724 >seq2507 Length=1093 Score = 140 bits (154), Expect = 8e-31 Identities = 227/326 (70%), Gaps = 2/326 (1%) Strand=Plus/Minus Query 86 CGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGG 145 |||||||||| | ||| || | | |||| | | || ||||||| ||||| |||| || Sbjct 1093 CGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGG 1034 Query 146 AATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAG 205 | || | | ||| | || |||| | || || | |||||| | ||| || Sbjct 1033 ACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAG 974 Query 206 CAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAAC 265 | |||||||||||||| || | | ||||||||| |||||| ||| | ||||| || Sbjct 973 CGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGAC 914 Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325 |||||| || | |||||||| ||||||| || ||||||||||||| ||||||| Sbjct 913 ACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTA 854 Query 326 GCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG--GTAACGTAGCTAACG 383 ||| |||||||| ||||| | || | | | || || || |||||||||| Sbjct 853 GCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACG 794 Query 384 CGTGAAGTTGACCGCCTGGGGAATAC 409 ||| |||| ||||||||||| ||| Sbjct 793 CGTTAAGTATCCCGCCTGGGGAGTAC 768 >seq2212 Length=1183 Score = 132 bits (146), Expect = 1e-28 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| || Sbjct 81 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 140 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||||| || | |||||||| ||||||| || |||||||| Sbjct 141 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGA 200 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368 ||||| ||||||| ||| |||||||| ||||| || || | | | || || Sbjct 201 TACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGTATCGACCCGTGC 260 Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||||| |||| ||||||||||| ||| Sbjct 261 AGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 302 >seq4752 Length=1388 Score = 129 bits (142), Expect = 2e-27 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 212 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 153 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 152 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 93 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 92 CAAATCCCAGGGCTCAACC 74 >seq2004 Length=1338 Score = 125 bits (138), Expect = 2e-26 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||| ||| ||| ||| Sbjct 1195 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTATTACAGAGGATGC 1254 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 1255 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 1314 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 1315 CAAATCCCAGGGCTCAACC 1333 >seq4592 Length=1233 Score = 123 bits (136), Expect = 6e-26 Identities = 155/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||| ||| |||||||||||||| || | | ||||||||| |||||| ||| | |||| Sbjct 1227 GTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGG 1168 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 | |||||||| || | |||||||| ||||||| || ||||||||||||| ||| Sbjct 1167 GCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTA 1108 Query 320 GTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG--GTAACGTAG 377 |||| ||| |||||||| ||||| | || | | | || || || |||| Sbjct 1107 GTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAG 1048 Query 378 CTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||||| |||| ||||||||||| ||| Sbjct 1047 CTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 1016 >seq4606 Length=1085 Score = 91.5 bits (100), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 231 GAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTG 290 ||||||||| |||||| ||| | |||| |||||||| || | |||||||| | Sbjct 1 GAACACCAACGGCGAAAGCACTCTGGTGGGCCGACACTGACACTGAGAGACGAAAGCTAG 60 Query 291 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGT 350 |||||| || ||||||||||||| ||||||| ||| |||||||| ||||| | Sbjct 61 GGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGC 120 Query 351 TGGGGATTTACTTCCTTG--GTAACGTAGCTAACGCGTGAA-GT-TGACCGCCTGGGGAA 406 || | | | || || || ||||||||||||| || || || ||||||||||| Sbjct 121 TGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAACGTATGCCCGCCTGGGGAG 180 Query 407 TAC 409 ||| Sbjct 181 TAC 183 >seq12142 Length=89851 Score = 87.8 bits (96), Expect = 5e-15 Identities = 80/100 (80%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATA-CGTAGGGTGCAAGC 66 || ||| |||| |||||||||| ||||||||||| |||||||| | | ||| ||||| Sbjct 68743 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGTCGCGGTAAGAGGGGGGGGGGCAAGT 68684 Query 67 GTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 106 ||| ||||||| ||||||| ||||| | || ||||||| Sbjct 68683 GTTCTTCGGAATGACTGGGCATAAAGGGCACGTAGGCGGT 68644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289386932288