Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corchorus_20capsularis_20[genbank_20GCA_5F001974805.1_202017-01-30] 16,522 sequences; 317,178,409 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq2489 268 3e-69 seq2240 268 3e-69 seq2190 268 3e-69 seq4730 259 2e-66 seq1773 248 3e-63 seq4552 224 4e-56 seq2959 181 4e-43 seq6248 163 1e-37 seq4542 158 4e-36 seq2298 158 4e-36 seq6284 156 2e-35 seq4501 141 3e-31 seq2291 141 3e-31 seq1767 93.3 2e-16 >seq2489 Length=1142 Score = 268 bits (296), Expect = 3e-69 Identities = 343/468 (73%), Gaps = 25/468 (5%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 517 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 576 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 577 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 636 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 637 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 696 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTC 374 || | ||||||| |||||||||||||||||||| | ||||| | | Sbjct 697 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT-----CCGTGGGTTCCCTTA 747 Query 375 GCGACACAACGC---AAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC 431 | | || || | |||| |||||||||||||| |||||||| |||| | | Sbjct 748 CCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAGCC 804 Query 432 CTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTC 491 || ||| | |||| || | ||| || | ||||||| || ||||||||||| Sbjct 805 CT---GGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTC 856 Query 492 CCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGG 551 |||| | ||||| ||||||||| ||||||||||||||| | |||||||||||||| ||| Sbjct 857 CCCGACGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGG 916 Query 552 AGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 917 AGTATTTAGCCTTGCAAGGTGGTCCTCGCTGATTCACACGGGATTCCA 964 >seq2240 Length=1012 Score = 268 bits (296), Expect = 3e-69 Identities = 341/462 (74%), Gaps = 27/462 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 448 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 389 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 388 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 329 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 328 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 269 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 268 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 216 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 215 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 161 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 160 CCCT---GGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 109 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| | ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 108 TCCCCGACGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 49 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACG 591 ||||||||||| ||| |||||||| | |||||||||| Sbjct 48 GGAGTATTTAGCCTTGCAAGGTGGTCCTCGCTGATTCACACG 7 >seq2190 Length=1071 Score = 268 bits (296), Expect = 3e-69 Identities = 346/470 (74%), Gaps = 27/470 (6%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 216 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 275 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 276 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 335 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 336 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 395 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 396 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 448 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 449 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 503 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 504 CCCT---GGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 555 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| | ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 556 TCCCCGACGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 615 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 616 GGAGTATTTAGCCTTGCAAGGTGGTCCTCGCTGATTCACACGGGATTCCA 665 >seq4730 Length=1205 Score = 259 bits (286), Expect = 2e-66 Identities = 346/472 (73%), Gaps = 28/472 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 516 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 457 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 456 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 397 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 396 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 337 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || || ||||||| |||||||||||||||||||| || || |||| Sbjct 336 ACA---ATTTGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 283 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 282 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 228 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 227 CCCT---GGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 176 Query 490 TCCCCGCCAGGGG--TACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACC 547 |||||| | |||| | |||||||| ||||||||||||||| | |||||||||||||| Sbjct 175 TCCCCGACGGGGGGTTCTTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACC 116 Query 548 AAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 115 CAGGAGTATTTAGCCTTGCAAGGTGGTCCTCGCTGATTCACACGGGATTCCA 64 >seq1773 Length=1187 Score = 248 bits (274), Expect = 3e-63 Identities = 317/429 (74%), Gaps = 27/429 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 409 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 350 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 349 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 290 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 289 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 230 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 229 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 177 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 176 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 122 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 121 CCCT---GGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 70 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| | ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 69 TCCCCGACGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 10 Query 550 GGAGTATTT 558 ||||||||| Sbjct 9 GGAGTATTT 1 >seq4552 Length=1218 Score = 224 bits (248), Expect = 4e-56 Identities = 248/327 (76%), Gaps = 15/327 (5%) Strand=Plus/Minus Query 273 CCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATT 332 |||| ||||||||||||||||| | ||||||||| | | || ||| | |||||||||| Sbjct 1218 CCTGGCCATGGATAGATCACTTGGTTTCGGGTCTACACCCAGCGACTGA-ACGCCCTATT 1160 Query 333 CGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTC 392 ||||||||||||||||||| || ||| | ||| |||| || || || || | || || Sbjct 1159 CGGACTCGCTTTCGCTACGCCTTCCCTAATCGG-TTAAGCTTGCCACTGAATGTAAG-TC 1102 Query 393 GCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCG 452 || | | |||| | ||||||| ||||||||||| | | || |||| |||| Sbjct 1101 GCTGACCCATTATACAAAAGGTACGCCGTCACCCGTTTCC----AGGC--------TCCG 1054 Query 453 ACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCAC 512 || | ||||| ||| ||||||||| |||||||||||||| || ||||| |||||| | Sbjct 1053 ACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGC 994 Query 513 CTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTG 572 ||||||||||||||||| || | ||||||||| | |||||||||| ||| || || Sbjct 993 CTTTCCCTCACGGTACTGGTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATG 934 Query 573 GTCCCGCCAGATTCACACGAAATTTCA 599 ||||| ||| |||| || |||||| Sbjct 933 GTCCCCCCATCTTCAGACAGGATTTCA 907 >seq2959 Length=1354 Score = 181 bits (200), Expect = 4e-43 Identities = 275/384 (72%), Gaps = 28/384 (7%) Strand=Plus/Minus Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| | ||| ||||||| ||||||| || | |||| ||||| |||| ||||| Sbjct 1348 TTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCGTCCTGGTCATGG 1289 Query 284 ATAGATCACTTCGCTTCGGGT--CTTGATC-GTGCCACTCATACGCCCTATTCGGACTCG 340 ||||||||| | |||||| | | | | ||| || | ||||||| |||||| Sbjct 1288 ATAGATCACCCAGGTTCGGGCTCCATAAGCAGTGACAATT----GCCCTATGAAGACTCG 1233 Query 341 CTTTCGCTACGGCTACCCCACACGGGT----TAACCTCGCGACACAACGCAA-ACTCGCA 395 |||||||||||||| || || | ||||| || ||| | | | |||| Sbjct 1232 CTTTCGCTACGGCT---CCGGTGGGTTCCCTTAACCAAGC--CACTGCCTATGAGTCGCC 1178 Query 396 GGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACG 455 |||||||||||||| |||||||| |||| | ||| ||| | |||| || Sbjct 1177 GGCTCATTCTTCAACAGGCACGCGGTCA---GAGCCCTG---GGCTC-----CTCCCACT 1129 Query 456 GATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTT 515 | ||| || | ||||||| || ||||||||||||||| | ||||| ||||||||| | Sbjct 1128 GCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGACGGGGGTTCTTTTCACCCT 1069 Query 516 TCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTC 575 |||||||||||||| | |||||||||||||| |||||||||||| ||| ||||||| Sbjct 1068 TCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTC 1009 Query 576 CCGCCAGATTCACACGAAATTTCA 599 | | |||||||||| ||| || Sbjct 1008 CTCGCTGATTCACACGGGATTCCA 985 >seq6248 Length=1935 Score = 163 bits (180), Expect = 1e-37 Identities = 355/521 (68%), Gaps = 43/521 (8%) Strand=Plus/Minus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 1174 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 1115 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 1114 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 1055 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 1054 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 995 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| ||| | | | | | Sbjct 994 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AGATAGGAAGAACTAGAAG 936 Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383 |||| || || | | | || |||| || | || |||| || | | | || Sbjct 935 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCA- 885 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGT--CACCTGGTAC------CTAA 435 |||||| | | ||| | ||||||| ||||||| | | || | |||| Sbjct 884 --TTTACTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGGTTGTGCGCTTTACTAA 827 Query 436 AAGGCACT--------TCAGCTC--------CGACGGATTGTAGGCACATGGTTTCAGGT 479 || | | | ||||| |||| |||||| ||| | | |||||| Sbjct 826 TAGAAAGTAAAGGCTATAAGCTCCCCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGT 767 Query 480 --ACTATTTCACTCCCCGCCA-GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 ||||| ||||||| || |||| |||||||||||||||||||||||||||| ||| Sbjct 766 TCTCTATTGCACTCCCTAACATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGC 707 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 ||||||||| |||| || ||||||||| |||||||||| Sbjct 706 TATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 666 >seq4542 Length=1073 Score = 158 bits (174), Expect = 4e-36 Identities = 354/521 (68%), Gaps = 43/521 (8%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 44 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 103 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 104 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 163 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 164 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 223 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| || | | | | | Sbjct 224 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 282 Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383 |||| || || | | | || |||| || | || |||| || | | | || Sbjct 283 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCA- 333 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGT--CACCTGGTAC------CTAA 435 |||||| | | ||| | ||||||| ||||||| | | || | |||| Sbjct 334 --TTTACTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGGTTGTGCGCTTTACTAA 391 Query 436 AAGGCACT--------TCAGCTC--------CGACGGATTGTAGGCACATGGTTTCAGGT 479 || | | | ||||| |||| |||||| ||| | | |||||| Sbjct 392 TAGAAAGTAAAGGCTATAAGCTCCCCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGT 451 Query 480 --ACTATTTCACTCCCCGCCA-GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 ||||| ||||||| || |||| |||||||||||||||||||||||||||| ||| Sbjct 452 TCTCTATTGCACTCCCTAACATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGC 511 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 ||||||||| |||| || ||||||||| |||||||||| Sbjct 512 TATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 552 >seq2298 Length=1127 Score = 158 bits (174), Expect = 4e-36 Identities = 354/521 (68%), Gaps = 43/521 (8%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 115 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 174 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 175 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 234 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 235 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 294 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| || | | | | | Sbjct 295 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 353 Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383 |||| || || | | | || |||| || | || |||| || | | | || Sbjct 354 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCA- 404 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGT--CACCTGGTAC------CTAA 435 |||||| | | ||| | ||||||| ||||||| | | || | |||| Sbjct 405 --TTTACTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGGTTGTGCGCTTTACTAA 462 Query 436 AAGGCACT--------TCAGCTC--------CGACGGATTGTAGGCACATGGTTTCAGGT 479 || | | | ||||| |||| |||||| ||| | | |||||| Sbjct 463 TAGAAAGTAAAGGCTATAAGCTCCCCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGT 522 Query 480 --ACTATTTCACTCCCCGCCA-GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 ||||| ||||||| || |||| |||||||||||||||||||||||||||| ||| Sbjct 523 TCTCTATTGCACTCCCTAACATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGC 582 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 ||||||||| |||| || ||||||||| |||||||||| Sbjct 583 TATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 623 >seq6284 Length=2191 Score = 156 bits (172), Expect = 2e-35 Identities = 352/520 (68%), Gaps = 42/520 (8%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 444 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 503 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 504 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 563 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 564 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 623 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| || | | | | | Sbjct 624 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 682 Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383 |||| || || | | | || |||| || | || |||| || | | | || Sbjct 683 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCA- 733 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGT--CACCTGGTAC------CTAA 435 |||||| | | ||| | ||||||| ||||||| | | || | |||| Sbjct 734 --TTTACTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGGTTGTGCGCTTTACTAA 791 Query 436 AAGGCACT--------TCAGCTC--------CGACGGATTGTAGGCACATGGTTTCAGGT 479 || | | | ||||| |||| |||||| ||| | | |||||| Sbjct 792 TAGAAAGTAAAGGCTATAAGCTCCCCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGT 851 Query 480 --ACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||| |||||| | |||| |||||||||||||||||||||||||||| |||| Sbjct 852 TCTCTATTGCACTCCTAACATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCT 911 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 |||||||| |||| || ||||||||| |||||||||| Sbjct 912 ATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 951 >seq4501 Length=1461 Score = 141 bits (156), Expect = 3e-31 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 1083 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 1142 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 1143 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 1202 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 1203 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 1262 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 ||||||||||| ||||| |||||| | | |||||||| Sbjct 1263 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 1302 >seq2291 Length=1252 Score = 141 bits (156), Expect = 3e-31 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 782 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 841 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 842 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 901 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 902 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 961 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 ||||||||||| ||||| |||||| | | |||||||| Sbjct 962 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 1001 Score = 75.2 bits (82), Expect = 4e-11 Identities = 73/92 (79%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 451 CGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAG-GGGTACTT 507 |||| |||||| ||| | | |||||| || ||| ||||||| || |||| ||| Sbjct 1161 CGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAACATAGGGTTCTT 1220 Query 508 TTCACCTTTCCCTCACGGTACTTGTCCGCTAT 539 ||||||||||||||||||||||||| |||||| Sbjct 1221 TTCACCTTTCCCTCACGGTACTTGTACGCTAT 1252 >seq1767 Length=1192 Score = 93.3 bits (102), Expect = 2e-16 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 481 CTATTTCACTCCCCGCCAG-GGGTACTTTT-CACCTTTCCCTCACGGTACTTGTCCGCTA 538 ||||| ||||||| || |||| ||||| ||||||||||||||||||||||| ||||| Sbjct 1168 CTATTGCACTCCCTAACATAGGGTTCTTTTTCACCTTTCCCTCACGGTACTTGTACGCTA 1109 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTA-ACGGGTGGTCCC 577 ||||||| |||| || ||||||||| | || ||||||| Sbjct 1108 TCGGTCATTGAGGAATACTTAGGCTTAGAGGGCTGGTCCC 1069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817299696128