Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corchorus_20capsularis_20[genbank_20GCA_5F001974805.1_202017-01-30] 16,522 sequences; 317,178,409 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4752 219 8e-55 seq2598 219 8e-55 seq2416 219 8e-55 seq2199 219 8e-55 seq2004 219 8e-55 seq1962 219 8e-55 seq1854 219 8e-55 seq15038 215 1e-53 seq2143 215 1e-53 seq1338 201 2e-49 seq2624 197 3e-48 seq9792 165 2e-38 seq2472 154 3e-35 seq4507 134 3e-29 seq9473 98.7 2e-18 seq11515 89.7 1e-15 seq12142 73.4 8e-11 seq2187 73.4 8e-11 >seq4752 Length=1388 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 274 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 333 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 334 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 393 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 394 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 453 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 454 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 497 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 498 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 556 Query 300 CCACT 304 ||||| Sbjct 557 CCACT 561 >seq2598 Length=1028 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 515 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 456 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 455 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 396 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 395 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 336 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 335 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 292 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 291 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 233 Query 300 CCACT 304 ||||| Sbjct 232 CCACT 228 >seq2416 Length=1040 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 116 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 175 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 176 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 235 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 236 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 295 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 296 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 339 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 340 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 398 Query 300 CCACT 304 ||||| Sbjct 399 CCACT 403 >seq2199 Length=1397 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 777 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 836 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 837 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 896 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 897 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 956 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 957 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 1000 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 1001 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 1059 Query 300 CCACT 304 ||||| Sbjct 1060 CCACT 1064 >seq2004 Length=1338 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 1133 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 1074 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 1073 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1014 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 1013 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 954 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 953 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 910 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 909 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 851 Query 300 CCACT 304 ||||| Sbjct 850 CCACT 846 >seq1962 Length=1043 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 385 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 444 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 445 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 504 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 505 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 564 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 565 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 608 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 609 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 667 Query 300 CCACT 304 ||||| Sbjct 668 CCACT 672 >seq1854 Length=1028 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 973 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 914 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 913 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 854 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 853 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 794 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 793 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 750 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 749 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 691 Query 300 CCACT 304 ||||| Sbjct 690 CCACT 686 >seq15038 Length=42480 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | |||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 6057 GGCATTGCTCCGCCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 6116 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||| |||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 6117 GAGTATGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 6176 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | | Sbjct 6177 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCCG 6236 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 6237 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 6280 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 6281 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 6339 Query 300 CCACT 304 ||||| Sbjct 6340 CCACT 6344 >seq2143 Length=1235 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 858 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 799 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 798 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 739 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 738 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 679 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||| ||| Sbjct 678 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATCAGCAGC 635 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 634 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 576 Query 300 CCACT 304 ||||| Sbjct 575 CCACT 571 >seq1338 Length=1085 Score = 201 bits (222), Expect = 2e-49 Identities = 244/327 (75%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| ||| || ||||||||||||||||||||| Sbjct 224 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 283 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 284 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGAT 343 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||||||| ||| | ||||||||| |||||| | | ||| || | | Sbjct 344 CGTCGCCTTGGTGGGCCTTTACCCCACCAACTAGCTAATCAGACATCGGCCGCTCCTATA 403 Query 181 GCGATAAATCTTT--GGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 || || | | || |||| | | || |||| | |||||||||||||| Sbjct 404 GC-ATGAGGCCTTGCGGTCCCCCA---CTTTCACCCTCAGGTCGTATGCGGTATTAGCTA 459 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||| | ||||| || | || | |||| ||| | | || |||||||||||| | Sbjct 460 ATCTTTCGACTAGTTATCCCCCACTACAGGGCACGTT-CCGATGTATTACTCACCCGTTC 518 Query 299 GCCACTAAGCTATATATCCAGCAAGCT 325 |||||| || || ||| |||||||| Sbjct 519 GCCACT-CGCCATCAATCTAGCAAGCT 544 >seq2624 Length=1002 Score = 197 bits (218), Expect = 3e-48 Identities = 244/327 (75%), Gaps = 9/327 (3%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| ||| || ||||||||||||||||||||| Sbjct 659 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 600 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 599 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGAT 540 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||||||| ||| | ||||||||| |||||| | | ||| || | | Sbjct 539 CGTCGCCTTGGTGGGCCTTTA-CCCACCAACTAGCTAATCAGACATCGGCCGCTCCTATA 481 Query 181 GCGATAAATCTTT--GGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 || || | | || |||| | | || |||| | |||||||||||||| Sbjct 480 GC-ATGAGGCCTTGCGGTCCCCCA---CTTTCACCCTCAGGTCGTATGCGGTATTAGCTA 425 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||| | ||||| || | || | |||| ||| | | || |||||||||||| | Sbjct 424 ATCTTTCGACTAGTTATCCCCCACTACAGGGCACGTT-CCGATGTATTACTCACCCGTTC 366 Query 299 GCCACTAAGCTATATATCCAGCAAGCT 325 |||||| || || ||| |||||||| Sbjct 365 GCCACT-CGCCATCAATCTAGCAAGCT 340 >seq9792 Length=19198 Score = 165 bits (182), Expect = 2e-38 Identities = 213/291 (73%), Gaps = 21/291 (7%) Strand=Plus/Minus Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78 |||| || |||| | || || |||||||||||||||||||||||||||||||||| ||| Sbjct 14195 TTTCGCCTATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTTTCTT 14136 Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTA 138 ||||||| |||||| | ||| |||||| | || ||||| |||| ||| |||||| |||| Sbjct 14135 AGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTA 14076 Query 139 TTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCTTTGGTC 197 || |||||| ||| |||||| | ||||||||| || | || ||| || || Sbjct 14075 TTGCGTCACCATCTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCCTT---- 14020 Query 198 AAAGAATGATGCCATCCTCTGACATTATGCGGT---ATTAGCGTTCGTTTCCAAACGTTA 254 ||| || || | ||| | ||| |||||| | ||||||| ||| Sbjct 14019 --------TTGC--TC--CTTAGCTTACGAGGTATAATTAGCAGTTGTTTCCAGCTGTTG 13972 Query 255 TTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305 |||| ||| || |||||||| || | | ||||||||||||||| |||||| Sbjct 13971 TTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCACCACTA 13922 >seq2472 Length=1046 Score = 154 bits (170), Expect = 3e-35 Identities = 118/140 (84%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 907 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 966 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 967 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1026 Query 121 CGTCGGCTTGGTGGGCTATT 140 | ||| |||||| |||||| Sbjct 1027 CATCGCCTTGGTAAGCTATT 1046 >seq4507 Length=1756 Score = 134 bits (148), Expect = 3e-29 Identities = 171/233 (73%), Gaps = 18/233 (8%) Strand=Plus/Plus Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| |||||| Sbjct 1 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 60 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCT 191 |||||| ||||||||||| |||||| | ||||||||| || | || ||| || Sbjct 61 AAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCC 120 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || ||| ||||| | | || | ||||||||| |||||||| | Sbjct 121 TT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTG 164 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| ||| || |||||||| || ||| ||||||||||||||||||||| Sbjct 165 TTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 216 >seq9473 Length=38651 Score = 98.7 bits (108), Expect = 2e-18 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 45 CTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCT 104 ||||||||||||||| ||||||||| ||||||||| ||||| ||||| | ||| ||||| Sbjct 22762 CTGCTGCCTCCCGTAAGAGTCTGGGTCGTGTCTCAATCCCAGTGTGGTTGATCATCCTCT 22703 Query 105 CAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACC 148 | | ||||| |||| ||| |||||| |||||| |||||| Sbjct 22702 CGAACTAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACC 22659 >seq11515 Length=64938 Score = 89.7 bits (98), Expect = 1e-15 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||| |||| Sbjct 47821 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCTTGTAG 47762 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGT 89 ||||||||||||||||| ||| || ||| Sbjct 47761 GAGTCTGGGCCGTGTCTTAGTGTCACTGT 47733 >seq12142 Length=89851 Score = 73.4 bits (80), Expect = 8e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 9 TGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGG 68 || ||| || |||| |||||||| ||| || |||| |||||||| | ||| ||| ||||| Sbjct 68822 TGGATCGGGCTTTCACCCATTGTCCAAGATTCCCCGCTGCTGCCCCTCGTGGGATTCTGG 68881 Query 69 GCCGTGTCTC 78 |||||||||| Sbjct 68882 GCCGTGTCTC 68891 >seq2187 Length=1134 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| |||||||| ||| |||| ||| || |||||||| || ||| |||| Sbjct 19 GGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTA 77 Query 288 CTCACCCGTCCGCCACT 304 ||||||||||||||||| Sbjct 78 CTCACCCGTCCGCCACT 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998235044352