Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corchorus_20capsularis_20[genbank_20GCA_5F001974805.1_202017-01-30] 16,522 sequences; 317,178,409 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq4672 316 3e-84 seq4333 268 1e-69 seq2477 268 1e-69 seq2407 268 1e-69 seq2339 268 1e-69 seq2226 268 1e-69 seq1735 268 1e-69 seq6615 253 3e-65 seq2572 253 3e-65 seq2015 253 3e-65 seq3079 246 5e-63 seq2273 233 3e-59 seq2432 210 3e-52 seq1809 199 6e-49 seq2134 161 2e-37 >seq4672 Length=1125 Score = 316 bits (350), Expect = 3e-84 Identities = 236/275 (86%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| |||||| |||||||||| |||||| ||||||| |||| || ||||| ||| Sbjct 448 CGAGGGAGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCATACATAGCTACCCT 507 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 ||| || |||||||| || || ||| |||||||||| ||| || ||||||||||||||| Sbjct 508 GCTGCGCTCTTGGCAGAACGACAGGTACACCAGAGGTATGTTCAACCCGGTCCTCTCGTA 567 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| || || ||||||||||||||| ||||||||| | |||||||||| |||||||||| Sbjct 568 CTAGGGTCAACTCCTCTCAAATTTCG-ACGCCCACGGCAGATAGGGACCAAACTGTCTCG 626 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||||| Sbjct 627 CGACGTTCTGAACCCAGCTCACGTACCACTTTAATTGGCGAACAGCCAAACCCTTGGGAC 686 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || ||||||||||||| || |||||||||||| Sbjct 687 CTGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 721 >seq4333 Length=1226 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 668 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 727 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 728 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 787 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 788 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 847 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 848 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 907 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 908 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 940 >seq2477 Length=1163 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 468 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 409 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 408 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 349 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 348 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 289 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 288 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 229 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 228 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 196 >seq2407 Length=1143 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 394 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 453 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 454 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 513 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 514 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 573 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 574 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 633 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 634 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 666 >seq2339 Length=1175 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 659 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 718 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 719 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCCTCCCGGTCCTCTCGTACT 778 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 779 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 838 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 839 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 898 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 899 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 931 >seq2226 Length=1246 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 728 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 787 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 788 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 847 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 848 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 907 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 908 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 967 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 968 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 1000 >seq1735 Length=1168 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 796 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 737 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 736 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 677 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 676 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 617 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 616 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 557 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 556 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 524 >seq6615 Length=9956 Score = 253 bits (280), Expect = 3e-65 Identities = 212/260 (82%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| ||| || |||| |||| Sbjct 666 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGTACATAGCTACCCTGCGATGCCTCTGGCG 607 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| |||||| ||| ||||| ||||||||||||||||| | |||| || Sbjct 606 AGACAACAGGTACACCAGCGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 547 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| |||| ||||||||| | |||||||||| ||||||||| ||||||| | ||||| Sbjct 546 GTCAAGATTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 487 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| ||||||||| ||||||||||| |||||||||||| || ||||||||| Sbjct 486 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 427 Query 256 GATGAGACGAGCCGACATCG 275 ||||||| |||||||||||| Sbjct 426 GATGAGATGAGCCGACATCG 407 >seq2572 Length=1289 Score = 253 bits (280), Expect = 3e-65 Identities = 212/260 (82%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| ||| || |||| |||| Sbjct 994 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGTACATAGCTACCCTGCGATGCCTCTGGCG 1053 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| |||||| ||| ||||| ||||||||||||||||| | |||| || Sbjct 1054 AGACAACAGGTACACCAGCGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 1113 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| |||| ||||||||| | |||||||||| ||||||||| ||||||| | ||||| Sbjct 1114 GTCAAGATTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 1173 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| ||||||||| ||||||||||| |||||||||||| || ||||||||| Sbjct 1174 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 1233 Query 256 GATGAGACGAGCCGACATCG 275 ||||||| |||||||||||| Sbjct 1234 GATGAGATGAGCCGACATCG 1253 >seq2015 Length=1125 Score = 253 bits (280), Expect = 3e-65 Identities = 212/260 (82%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| ||| || |||| |||| Sbjct 620 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGTACATAGCTACCCTGCGATGCCTCTGGCG 679 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| |||||| ||| ||||| ||||||||||||||||| | |||| || Sbjct 680 AGACAACAGGTACACCAGCGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 739 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| |||| ||||||||| | |||||||||| ||||||||| ||||||| | ||||| Sbjct 740 GTCAAGATTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 799 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| ||||||||| ||||||||||| |||||||||||| || ||||||||| Sbjct 800 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 859 Query 256 GATGAGACGAGCCGACATCG 275 ||||||| |||||||||||| Sbjct 860 GATGAGATGAGCCGACATCG 879 >seq3079 Length=1435 Score = 246 bits (272), Expect = 5e-63 Identities = 212/261 (81%), Gaps = 1/261 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| ||| || |||| |||| Sbjct 486 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGTACATAGCTACCCTGCGATGCCTCTGGCG 427 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| |||||| ||| ||||| ||||||||||||||||| | |||| || Sbjct 426 AGACAACAGGTACACCAGCGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 367 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACG-TTCTGAACC 194 |||| |||| ||||||||| | |||||||||| ||||||||| ||||| || | |||| Sbjct 366 GTCAAGATTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGCTTTTAAACC 307 Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254 |||||| ||| ||||||||| ||||||||||| |||||||||||| || |||||||| Sbjct 306 CAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCA 247 Query 255 GGATGAGACGAGCCGACATCG 275 |||||||| |||||||||||| Sbjct 246 GGATGAGATGAGCCGACATCG 226 >seq2273 Length=1457 Score = 233 bits (258), Expect = 3e-59 Identities = 228/282 (81%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTT-CAGCTCTTATCC-CTTCCAAACTTAGCTTCCCAG 61 || |||||| |||||||||||| |||| |||||| ||||| |||| ||| ||||| Sbjct 1246 GGTGGGCTTACTACTTAGATGCCTTTCAGCAGTTATCCGCTTCCGCACTTGGCTACCCAG 1187 Query 62 C-TATGCACTTGGCAGTACAACTGGTG-CACCAGAGGTTTG--TCCATCCCGGTCCTCTC 117 | | | | | |||| | ||||||| ||||||||| ||| ||| ||||||||||||| Sbjct 1186 CGTTTACCGTGGGCACGATAACTGGTTACACCAGAGGATTGCGTCCTTCCCGGTCCTCTC 1127 Query 118 GTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGAT-AGGGACCGAACTGT 176 |||||| ||| || ||||||||| || |||||||| ||||| | |||||||||||| Sbjct 1126 GTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATAATGGACCGAACTGT 1067 Query 177 CTCGC-GACGTTC-TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC-AACCC 233 ||| | ||||||| |||||||||||| ||| || |||||||||||||||||||| ||||| Sbjct 1066 CTCACGGACGTTCATGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCTAACCC 1007 Query 234 TTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| || |||| |||||||||| | || |||||||||||| Sbjct 1006 TTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 965 >seq2432 Length=1182 Score = 210 bits (232), Expect = 3e-52 Identities = 181/223 (81%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 960 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 1019 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 1020 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 1079 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 1080 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 1139 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||||||||||||| ||| || ||||||||||||||||| Sbjct 1140 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAG 1182 >seq1809 Length=1520 Score = 199 bits (220), Expect = 6e-49 Identities = 184/233 (79%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| ||| || ||| |||||| ||||| ||| ||||| ||||| | ||| | Sbjct 256 AACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAAC 197 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || |||||||||||||| || ||||||| || | ||| || || ||| ||| Sbjct 196 CCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGAT 137 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||||||||||||| ||||||||| |||||| ||| ||| || ||| ||| |||||| Sbjct 136 AGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAA 77 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 76 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 24 >seq2134 Length=1398 Score = 161 bits (178), Expect = 2e-37 Identities = 114/129 (88%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 148 ACGCCCACGACGGAT-AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGC 206 |||||||| ||||| | ||||||||||||||| |||||||||||||||||||| ||| | Sbjct 1382 ACGCCCACACCGGATTATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTAC 1323 Query 207 CTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAG 266 | ||||||||||||||||||||||||||||| || |||| |||||||||| | || ||| Sbjct 1322 CGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAG 1263 Query 267 CCGACATCG 275 ||||||||| Sbjct 1262 CCGACATCG 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780675027592