Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corchorus_20olitorius_20[genbank_20GCA_5F001974825.1_202017-01-30] 24,918 sequences; 334,911,943 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq2935 113 2e-22 >seq2935 Length=2778 Score = 113 bits (124), Expect = 2e-22 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||||||||| |||||||| || || ||||| || ||||||||| ||||||| ||| Sbjct 2687 TCGATGTACGGCGGCGGTTTTGCGACCGTGCCGGCCTATCTGGCCGACATGTTCGGCACG 2746 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCT 92 |||||||| || || |||||||| |||||||| Sbjct 2747 CAGATGGTGGGCGCCATCCACGGCCGCCTGCT 2778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1775557456320