Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq31464 86.0 1e-14 seq199 86.0 1e-14 seq33 75.2 2e-11 >seq31464 Length=156017 Score = 86.0 bits (94), Expect = 1e-14 Identities = 209/310 (67%), Gaps = 9/310 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69 |||| |||||||||| | |||| ||| || | ||||| || |||| || || || Sbjct 106699 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 106758 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 106759 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 106815 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | |||| | || || Sbjct 106816 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 106871 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 106872 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 106931 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 106932 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 106991 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 106992 CCACTCGAAC 107001 Score = 86.0 bits (94), Expect = 1e-14 Identities = 209/310 (67%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69 |||| |||||||||| | |||| ||| || | ||||| || |||| || || || Sbjct 135653 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 135594 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 135593 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 135537 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | |||| | || || Sbjct 135536 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 135481 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 135480 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 135421 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 135420 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 135361 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 135360 CCACTCGAAC 135351 >seq199 Length=13696 Score = 86.0 bits (94), Expect = 1e-14 Identities = 209/310 (67%), Gaps = 9/310 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69 |||| |||||||||| | |||| ||| || | ||||| || |||| || || || Sbjct 940 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 999 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 1000 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 1056 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | |||| | || || Sbjct 1057 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 1112 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 1113 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 1172 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 1173 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 1232 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 1233 CCACTCGAAC 1242 >seq33 Length=4152058 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 |||||||||| |||||| ||| ||| ||||||||| || |||| | |||| Sbjct 16994 GACGCGAAACTGATCGATCTAGCCATGAGTAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 17053 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||||| |||||||| | || ||||||| ||||||| Sbjct 17054 GGACCGAACCCACGTATGTGGCAAAGTACGGGGATGACTTGTGGCTAGGGGTAAAAGGCC 17113 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 17114 AACCAAGATTGGATATAGCTGGT 17136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972493918208