Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq16169 122 5e-26 seq13776 122 5e-26 seq8 113 3e-23 seq64 104 1e-20 seq41 104 1e-20 seq36 98.7 6e-19 seq6 91.5 8e-17 seq17 86.0 3e-15 seq65 77.0 2e-12 >seq16169 Length=317 Score = 122 bits (134), Expect = 5e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| | ||||| | |||||| || Sbjct 118 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 59 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 58 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 2 >seq13776 Length=265 Score = 122 bits (134), Expect = 5e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| | ||||| | |||||| || Sbjct 67 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 126 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 127 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 183 >seq8 Length=7373812 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||| | ||||| | ||| || || Sbjct 7372883 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGTGGAGTCCTTAAAGCAACGTCTGCC 7372942 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 7372943 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 7372999 >seq64 Length=2007380 Score = 104 bits (114), Expect = 1e-20 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| || ||||| | ||||| | |||||| || Sbjct 13746 GAACCCAAAGACTTTGATTTCTCATA-GGTGCTGGCGGAGTCCTTAAAGCAACATCCACC 13688 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| ||||||| ||||| |||| ||||| |||||||||||||||||||||| Sbjct 13687 AATCCCTGATCGGCATCGTTTATGGTTTTGACTAGGACGGTATCTGATCGTCTTCGA 13631 >seq41 Length=3648464 Score = 104 bits (114), Expect = 1e-20 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| | ||||| || |||||| | Sbjct 1718836 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCAGAGTCCTTATAGCAACATCCACT 1718895 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 | ||||||||||||| ||||| |||| |||||| ||||||||| || |||||| Sbjct 1718896 AACCCCTAGTCGGCATTGTTTATGGTTGAGACTAGAACGGTATCTCATTGTCTTC 1718950 >seq36 Length=4168593 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||| || |||||||| | ||||| | |||||| || Sbjct 3043737 GAACCCAAAGACTTTGATTTTTCATAAGGTGCTAACGGAGTCCTTAAAGCAACATCTGCC 3043678 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | || ||| ||||| ||||||||||| |||||||||||||| ||||||| Sbjct 3043677 AATCCATGGTTAACATCGTTTATGGTTAAGACTAGGACGGTATCTGATCATCTTCGA 3043621 >seq6 Length=8244739 Score = 91.5 bits (100), Expect = 8e-17 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCC 65 ||||||||||||||||||||||||||||| | ||| | |||||| |||||| Sbjct 7466453 CAAAGACTTTGATTTCTCGTAAGGTGCCGGCGGGGTCCTTAAACCAACATCTGTCGATCC 7466394 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 || ||| |||| ||||| |||| | || || ||||||||||||||||| Sbjct 7466393 CTGGTCAGCATCGTTTATGGTTGCTAATAGGATGGTATCTGATCGTCTTC 7466344 >seq17 Length=6318978 Score = 86.0 bits (94), Expect = 3e-15 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||||| ||||||||||| ||| | | |||||| || Sbjct 5834707 GAACCCAAAGACTTTTATTTCTTATAAGGTGCCGACGGAGCCCTTAAAGCAACATCCACC 5834766 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||| ||| |||| ||||| | || |||||| || | ||||| ||| ||||| Sbjct 5834767 AATCCCTGGTCAGCATCGTTTATGTTTGAGACTAGGATGATATCTAATCATCTTC 5834821 Score = 75.2 bits (82), Expect = 6e-12 Identities = 85/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||| |||| ||| ||| | |||| | |||||| | Sbjct 5231448 GAACCCAAAGACTTTGATATCTCATAAAGTGTTGGCAAAGTCCTTAAAGCAACATCCGGC 5231389 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||| |||| || |||||||| | ||||| ||| ||||||||||||||| Sbjct 5231388 AATCCCTGGTCGATATTGTTTACGGGTTGGACTAGGACTGTATCTGATCGTCTT 5231335 >seq65 Length=1937772 Score = 77.0 bits (84), Expect = 2e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 ||| ||||||||||| |||||| |||| ||| || ||||| | |||||| Sbjct 1222428 AACTCAAAGACTTTGCTTTCTCATAAGATGCTGACAGAGTCCTTAAAGCAACATCTGTAA 1222487 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106 |||||| || ||||| ||||| |||| |||||| ||||||||||| Sbjct 1222488 ATCCCTGGTTGGCATCGTTTATGGTTGAGACTAGGACGGTATCTG 1222532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278317878960