Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq31464 141 1e-31 seq199 141 1e-31 seq26 111 2e-22 seq22 100 4e-19 seq12 91.5 2e-16 seq92 89.7 7e-16 seq18 89.7 7e-16 seq80 87.8 2e-15 seq47 87.8 2e-15 seq8 84.2 3e-14 seq4 73.4 5e-11 >seq31464 Length=156017 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 108056 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 107998 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 107997 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 107951 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 107950 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 107897 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 107896 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 107837 Query 246 GTA 248 ||| Sbjct 107836 GTA 107834 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 134296 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 134354 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 134355 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 134401 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 134402 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 134455 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 134456 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 134515 Query 246 GTA 248 ||| Sbjct 134516 GTA 134518 >seq199 Length=13696 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 2297 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 2239 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 2238 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 2192 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 2191 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 2138 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 2137 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 2078 Query 246 GTA 248 ||| Sbjct 2077 GTA 2075 >seq26 Length=4561837 Score = 111 bits (122), Expect = 2e-22 Identities = 172/243 (71%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||| | ||||||| ||| ||||| | ||||||| | ||||| ||| ||| | | Sbjct 4205079 CCTTCTAGCACCGGGTAGGTGTCAGACTCTATACATTGTGTTACCA-CTTAGCAGAGTTC 4205137 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | || | | || || | Sbjct 4205138 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGT------CTCTTTCTTAAGAAA 4205191 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | | || || | || || |||||||||||||| |||| ||||||||||| ||||| Sbjct 4205192 AAGAT----AGGAGAG-CATCCATTCTCCCGAAGTTATGGGGTCATTTTGCCGAGTTCCT 4205246 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 4205247 TCGACATGGTTCTCTTAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 4205306 Query 246 GTA 248 ||| Sbjct 4205307 GTA 4205309 >seq22 Length=5416867 Score = 100 bits (110), Expect = 4e-19 Identities = 161/229 (70%), Gaps = 12/229 (5%) Strand=Plus/Minus Query 20 GCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAA 79 ||||| ||||| | ||||||| | ||||| ||| ||| | | |||||||||| ||| Sbjct 780108 GCAGGTGTCAGACTCTATACATTGTGTTACCA-CTTGGCAGAGTCTTGTGTTTTTAATAA 780050 Query 80 ACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCACCAGCAG 139 | |||| || ||| || | | |||||| | || || | || || Sbjct 780049 ATAGTCCCTACCCCCTGGTATGTGCGACTTTCCTAAGGAAAAAATA---------AG-AG 780000 Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 | ||||| || | ||||||||||||| ||||||| ||| |||||| | || ||||| | Sbjct 779999 AG-CACCCTTTTGCTCGAAGTTACGGGGTCATTTTGTCGAGTTCCTTCAACATAGTTCTC 779941 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||||||||||| |||||| || || |||||||||||| |||| Sbjct 779940 TCAAGCGCCTTAGTATACTCTACTTGTTCATCTGTGTCGGTTTGGGGTA 779892 >seq12 Length=6689851 Score = 91.5 bits (100), Expect = 2e-16 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||| |||||| | |||||||||||| |||||| || ||||||| | |||| | Sbjct 4326469 GGCACCTCTTCTCTCAAAGTTACGGGGCTATTTTGGTGAGTTCCTTAGAGAGAGTTGTCT 4326410 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 4326409 CGTGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 4326362 >seq92 Length=829607 Score = 89.7 bits (98), Expect = 7e-16 Identities = 166/243 (68%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||| || || || |||| ||||| | |||| |||| ||||| ||| ||| || Sbjct 326660 CCTTTCAGCATCGAACAGGTGTCAGACTCTATAGATCGTGTTACCA-CTTAGCAGAATCC 326718 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || ||| || | | || || | Sbjct 326719 TGTGTTTTTATTAAACAGTCGCTACCCCCTCGTCTATGTCGCTTTCCTAAGAAAAAAAT- 326777 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || || |||| |||||||||||||||| ||| |||||||| || || || Sbjct 326778 ---------AGGAGAA-CACCTCTTCTCCCGAAGTTACAGGGTCATTTTGCTGAGTTTCT 326827 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | | || |||| | | | | || || ||| |||||| || ||||| ||||||||| | Sbjct 326828 TCAACATGGTTCTCTCTAGCACCGTAATATACTCTACTTGTTCACCTATGTCGGTTTGGG 326887 Query 246 GTA 248 ||| Sbjct 326888 GTA 326890 >seq18 Length=5997143 Score = 89.7 bits (98), Expect = 7e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||||| ||||||| ||| |||||| ||| |||||| | || |||| | | Sbjct 3842403 GCACCCCTTCTCCCAAAGTTACTGGGTCATTTTATCGAGTTCCTTCAACATGGTTCTCTC 3842344 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | |||| |||||| |||||| || ||||| |||| |||| |||| Sbjct 3842343 AAGCGCCCTAGTATACTCTACTTGTTCACCTATGTCAGTTTGGGGTA 3842297 Score = 86.0 bits (94), Expect = 9e-15 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||| ||| ||||||| || ||||||| | |||| | Sbjct 4798599 GGCACCCCTTCTCCCGAAGTTACGAGGCTATTTTGCTGAGTTCCTTAGAGATAGTTATCT 4798540 Query 201 CGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||||| || || ||||||| ||||||| |||| |||| |||| Sbjct 4798539 TGCGC-CCTTAGGTGTTTTCTACCTAACCACCTATGTCAGTTTCGGGTA 4798492 Score = 77.0 bits (84), Expect = 5e-12 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||| ||||||| |||| |||||| |||| |||||| || |||| | | Sbjct 4820482 GCACCCCTTCTCTGGAAGTTATGGGGTCATTTTACCGAGTTCCTTCGACATGGTTCTCTC 4820541 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | || |||||| |||||| || ||||||| | | ||| |||| Sbjct 4820542 AAGCACCCTAGTATACTCTACTTGTTCACCTGTTTTGATTTGGGGTA 4820588 >seq80 Length=1357521 Score = 87.8 bits (96), Expect = 2e-15 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||| |||| | |||||| |||| |||||| |||||||||| | |||| | Sbjct 714283 GGCACCCTGTCTCTCAAAGTTATGGGGATATTTTGTTGAATTCCTTAGAGAGAGTTGTCT 714224 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || || ||| ||||||||||||| |||||| |||||||||| |||| Sbjct 714223 CGCACCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTTAGGGTA 714176 >seq47 Length=2762240 Score = 87.8 bits (96), Expect = 2e-15 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||| |||||| ||||||||| |||| ||||| |||| ||||||| | |||| | Sbjct 1753086 GGCACCTCTTCTCTCGAAGTTACAGGGCTATTTTACCGAGTTCCTTAGAGAGAGTTATCT 1753145 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||| |||||| |||| |||| Sbjct 1753146 CGCGCCCCTAGGTATTCTCTACCTACCCACATGTGTCAGTTTTGGGTA 1753193 >seq8 Length=7373812 Score = 84.2 bits (92), Expect = 3e-14 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||| ||||||| |||||||| |||||||||||| || ||||||| | |||| | Sbjct 665912 GGCACCTCTTCTCCTGAAGTTACTGGGCCATTTTGCTGAGTTCCTTAGAGAGAGTTGTCT 665853 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| |||||||||||||| |||| | ||| |||| |||| Sbjct 665852 CGCGC-CCTAAGTATTCTCTACCTACCCACATTTGTTTGTTTTGGGTA 665806 >seq4 Length=9149724 Score = 73.4 bits (80), Expect = 5e-11 Identities = 71/90 (79%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||| ||| ||||| | ||||||| | ||||| ||| ||| | | Sbjct 834698 CCTTCCAGCACCGGGTAGGTGTCAGACTCTATACATTGTGTTACCA-CTTAGCAGAGTTC 834756 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCT 95 |||||||||| |||||||||||| ||| || Sbjct 834757 TGTGTTTTTAATAAACAGTCGCTACCCCCT 834786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694188341672