Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq31464 107 2e-21 seq199 107 2e-21 seq18 80.6 3e-13 seq92 77.0 4e-12 seq47 75.2 1e-11 >seq31464 Length=156017 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 108275 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 108216 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 108215 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 108157 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 108156 ACAAGGAATTTCGCTACCTTAGGACCGTTA 108127 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 134077 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 134136 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 134137 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 134195 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 134196 ACAAGGAATTTCGCTACCTTAGGACCGTTA 134225 >seq199 Length=13696 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 2516 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 2457 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 2456 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 2398 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 2397 ACAAGGAATTTCGCTACCTTAGGACCGTTA 2368 >seq18 Length=5997143 Score = 80.6 bits (88), Expect = 3e-13 Identities = 101/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85 |||||| |||| | || |||| || ||||||||| || | | ||||||||||| | Sbjct 4820150 GGTCTTACCGTCTAACCGTTGGTACTCTGCATCTTCATGGAGAATTCAATTTCACTGTGT 4820209 Query 86 TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGAC 145 || | | || | || ||||||||||||||||||| ||||| | || Sbjct 4820210 CCATGTTGGACATAGTGGGGCAGTCGAGACACCATTCGTGCAGGTCGCTACTTATGCAAC 4820269 Query 146 AAGGAATTTCGCTACCTTAGGAC 168 ||||||||| ||||||||| ||| Sbjct 4820270 AAGGAATTTTGCTACCTTATGAC 4820292 >seq92 Length=829607 Score = 77.0 bits (84), Expect = 4e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||| |||| Sbjct 326541 ACACCATTTGTGCAAGTCGGTACTTATGCGACAAGGAATTTTGCTACCTTAGGACAGTTA 326600 >seq47 Length=2762240 Score = 75.2 bits (82), Expect = 1e-11 Identities = 92/127 (72%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 48 TAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNNN 106 || || |||||||||| || | | |||||| |||| | | || ||||||| Sbjct 1752776 TAGTCCGCATCTTCACAGACATGTCTATTTCATCGAGC-CTCTCTTCGAGACAGTGTCCA 1752834 Query 107 NNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 166 ||| || ||||| | ||| ||||||||| ||||||||||||||||||||||| | Sbjct 1752835 GATCGTTACGCCTTTCGTACGGGTTGGAACTTACTCGACAAGGAATTTCGCTACCTTAAG 1752894 Query 167 ACCGTTA 173 || |||| Sbjct 1752895 ACTGTTA 1752901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547033209336