Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq31464 235 1e-59 seq30015 235 1e-59 seq29638 188 2e-45 seq29881 170 4e-40 seq26 161 2e-37 seq82 159 7e-37 seq44 143 6e-32 seq3 138 2e-30 seq48 129 1e-27 seq92 120 7e-25 seq12 102 2e-19 seq62 96.9 7e-18 >seq31464 Length=156017 Score = 235 bits (260), Expect = 1e-59 Identities = 259/337 (77%), Gaps = 21/337 (6%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 102825 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 102768 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 102767 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 102708 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 102707 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 102648 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 102647 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 102601 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | | | | | |||| | ||||||||| |||||||| ||| | ||| || ||| Sbjct 102600 TTGCTCCTCAG-CGTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAA 102544 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 102543 GGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 102507 Score = 235 bits (260), Expect = 1e-59 Identities = 259/337 (77%), Gaps = 21/337 (6%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 139527 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 139584 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 139585 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 139644 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 139645 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 139704 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 139705 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 139751 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | | | | | |||| | ||||||||| |||||||| ||| | ||| || ||| Sbjct 139752 TTGCTCCTCAG-CGTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAA 139808 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 139809 GGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 139845 >seq30015 Length=1280 Score = 235 bits (260), Expect = 1e-59 Identities = 259/337 (77%), Gaps = 21/337 (6%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 1239 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 1182 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 1181 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1122 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 1121 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 1062 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 1061 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 1015 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | | | | | |||| | ||||||||| |||||||| ||| | ||| || ||| Sbjct 1014 TTGCTCCTCAG-CGTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAA 958 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 957 GGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 921 >seq29638 Length=1185 Score = 188 bits (208), Expect = 2e-45 Identities = 158/190 (83%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||| |||| || || ||||||||||||||||||| || Sbjct 110 CCGTAGGCCTTCTACCTC-CACGTGGCACTG-CTCCATCAGGCTTTCGCCCATTGCGAAA 167 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||| ||||||| || ||||||||||| |||||| |||| Sbjct 168 AATTCCCCACTGCTGCCTCCCGTAGAAGTCTGGGCCCTGTCTCAGTTCTAGTGTGGCTGA 227 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCC-TTGGTGAGCCATTACCTCACCAACTAG 188 |||||||||| |||||| ||| |||| ||||| ||||| || ||| ||| |||||| || Sbjct 228 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTTGGTAAGTTATTGCCTTACCAACAAG 287 Query 189 CTAATCCGAC 198 |||||| ||| Sbjct 288 CTAATCAGAC 297 >seq29881 Length=1244 Score = 170 bits (188), Expect = 4e-40 Identities = 139/166 (84%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 34 GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTA 93 ||||||| || | ||| |||||||||||| || |||||| |||||||||||||||| Sbjct 1112 GGCATTG-CTCCAACAGACTTTCGCCCATTACGAAAAATTCCCAACTGCTGCCTCCCGTA 1054 Query 94 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGA 153 ||||||| | || ||||||||| |||||||| |||||||||||||| |||||| ||| | Sbjct 1053 GGAGTCTAGGCCCTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTTA 994 Query 154 TCGTCGCC-TTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || | ||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct 993 TCATTGCCTTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 948 >seq26 Length=4561837 Score = 161 bits (178), Expect = 2e-37 Identities = 129/153 (84%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 4561797 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 4561740 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || ||||||||||||||||||||| |||||||||| |||||||||||| ||||| Sbjct 4561739 TTGCGAAAAATTCCCCACTGCTGCCTCCCGCAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 4561680 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGAT 154 ||| |||||||||||||| |||||| ||| ||| Sbjct 4561679 GTGGCTGATCATCCTCTCGGACCAGCTACTGAT 4561647 >seq82 Length=1253720 Score = 159 bits (176), Expect = 7e-37 Identities = 152/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 18 CTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCC 77 |||||| ||| |||||| |||| |||||| |||||||||||||||||||| ||||||| Sbjct 774864 CTTCTT-CACTCACGCGATATTGT-TGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCC 774921 Query 78 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTC 137 ||| ||||| || || |||||| || |||||||||||| | |||||| ||||||||| Sbjct 774922 ACTACTGCCCCCTGTGGGAGTCCGGGCCGTGTCTCAGTCCTAGTGTGGTTGATCATCCGA 774981 Query 138 TCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 ||||||| || ||| | | |||||| |||| |||||| |||||| | ||||| | | Sbjct 774982 AAAGACCAGCTAAACATCATTGGCTTGGTCAGCCTTTACCTGACCAACGACCTAATACTA 775041 Query 198 CCTAGGCTCATC 209 ||||| ||| Sbjct 775042 TGCAGGCTTATC 775053 >seq44 Length=3230653 Score = 143 bits (158), Expect = 6e-32 Identities = 150/193 (78%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| |||||||| |||||| |||||| ||| | ||||| Sbjct 1810775 CCTTCTT-CACTCACGCGATATTG-CTGGATCAAGCTTTCACCCATTATCCTAGATTCCT 1810832 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATC-ATCC 135 |||||||||| || | ||||| | | || ||||||||| ||||| |||||||| ||| Sbjct 1810833 CACTGCTGCCCTCCATGGGAGTTTAGGCCATGTCTCAGTCCCAGTATGACTGATTTATCT 1810892 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCC 195 ||||||| || | ||| | | ||||||||||| |||||| | |||| | ||||| | Sbjct 1810893 GAAAAGACCAGCTAAGCATCATTGGCTTGGTGAGCCTTTACCTAATCAACGACCTAATAC 1810952 Query 196 GACCTAGGCTCAT 208 | ||||||||| Sbjct 1810953 TATGTAGGCTCAT 1810965 >seq3 Length=9040196 Score = 138 bits (152), Expect = 2e-30 Identities = 149/193 (77%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || |||| ||| || |||||| | | || || |||||| || |||| | ||| || || Sbjct 1805186 TTCACAACCCGCAGGCCTTCTACCTC-CATGCAGCATTG-CTCCATCAAGATTTTGCTCA 1805129 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 || || |||||| ||||||||| || |||||||||||| ||||||||||| ||||| Sbjct 1805128 TTAAGGAAAATTCCCTACTGCTGCCACC-GTAGGAGTCTGGGTCGTGTCTCAGTCCCAGT 1805070 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||||||||||| || ||| | || |||| | |||||| | | ||| |||||| Sbjct 1805069 GTGGCTGATCATCCTTTCGGACTAACTATTGATCAT---CTTGGTAATCTATTGCCTCAC 1805013 Query 182 CAACTAGCTAATC 194 ||||||||||||| Sbjct 1805012 CAACTAGCTAATC 1805000 >seq48 Length=2779969 Score = 129 bits (142), Expect = 1e-27 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 51 GCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTC 110 ||||| ||||||||||||| |||||||||||| ||| |||| ||||| || ||||||| Sbjct 1139346 GCTTTTGCCCATTGTCCAAGATTCCCCACTGCAGCCCTCCGTGGGAGTACGGGCCGTGTC 1139405 Query 111 TCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGC 170 ||||| |||||||| |||||||||| |||||| || | || | | |||||| ||| Sbjct 1139406 TCAGTCCCAGTGTGGCTGATCATCCAAAAAGACCATCTAAGCATTATTGGCTTGGTCAGC 1139465 Query 171 CATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209 | |||| | || || | ||||| | || ||| |||||| Sbjct 1139466 CTTTACGTGACTAATGACCTAATACTACGTAGACTCATC 1139504 >seq92 Length=829607 Score = 120 bits (132), Expect = 7e-25 Identities = 125/160 (78%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| ||| |||||| |||||| ||||||||||||| ||||| Sbjct 750619 CCTTCTT-CACTCACGCGATATTAT-TGGATCGGGCTTTTGCCCATTGTCCAAGATTCCT 750562 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||| || || ||||| |||||| | |||||||||||| |||||||| ||||||||| Sbjct 750561 TACTACTACC-CCCGTGGGAGTCCGAGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCG 750503 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 ||||||| || | ||| | | |||||| ||| | ||| Sbjct 750502 AAAAGACCAGCTAAGCATCATTGGCTTGGTTAGCTAATAC 750463 >seq12 Length=6689851 Score = 102 bits (112), Expect = 2e-19 Identities = 98/122 (80%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||| | |||| ||||||| ||||||||| Sbjct 5259044 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGTGATATTG-CTGGATCGGGCTTTCGC 5259101 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 |||||||||| |||||||||||||||| | ||| ||||| || |||||||||| || Sbjct 5259102 ACATTGTCCAAGATTCCCCACTGCTGCCCCTCGTGGGAGTTCGGGTCGTGTCTCAGACCC 5259161 Query 119 AG 120 || Sbjct 5259162 AG 5259163 >seq62 Length=2056646 Score = 96.9 bits (106), Expect = 7e-18 Identities = 92/118 (78%), Gaps = 15/118 (13%) Strand=Plus/Plus Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 |||||||||||||||| ||||||| || ||| ||||| |||||||| ||| | Sbjct 770407 CCCACTGCTGCCTCCC-----AGTCTGGGCCCTGTATCAGTCCCAGTGTGGCTG-----C 770456 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAA 192 |||||||||||| ||| |||| | |||||||| || ||||||||||||||||| Sbjct 770457 CTCTCAGACCAGCTACTGATCATTGCCTTGGTAAG-----GCCTCACCAACTAGCTAA 770509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071662705920