Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq13195 75.2 7e-12 seq89 71.6 8e-11 seq64 71.6 8e-11 seq8 71.6 8e-11 >seq13195 Length=256 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 156 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 213 Query 122 GCT 124 ||| Sbjct 214 GCT 216 >seq89 Length=920176 Score = 71.6 bits (78), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| ||| ||||| |||| | |||||| ||||||||||||| |||||| Sbjct 84702 TCACTAAACCATTCAATT-GGTAG-AAGCAATGGGCGGTGTGTACAAAGGGCGGGGACG- 84758 Query 110 AATACAACGCAAGCT 124 ||| ||||||||||| Sbjct 84759 AAT-CAACGCAAGCT 84772 >seq64 Length=2007380 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| || |||| |||||||||| || |||||||||||||| ||||||||| |||||| | Sbjct 27006 TTCAATCAGTAG-AAGCGACGGGTGGTGTGTACAAAGGGCAAGGACGTAAT-CAACGCGA 26949 Query 122 GCT 124 ||| Sbjct 26948 GCT 26946 >seq8 Length=7373812 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||| ||||||||||| | |||||| | Sbjct 7372325 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACGTAGT-CAACGCGA 7372382 Query 122 GCT 124 ||| Sbjct 7372383 GCT 7372385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300711271520