Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq31464 122 7e-26 seq27758 122 7e-26 seq18 95.1 1e-17 seq27476 93.3 4e-17 seq24 93.3 4e-17 seq4 87.8 1e-15 seq3 86.0 5e-15 seq388 77.0 3e-12 >seq31464 Length=156017 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 103694 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 103635 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 103634 GATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 103575 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 103574 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 103535 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 138658 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 138717 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 138718 GATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 138777 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 138778 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 138817 >seq27758 Length=872 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 45 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 104 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 105 GATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 164 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 165 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 204 >seq18 Length=5997143 Score = 95.1 bits (104), Expect = 1e-17 Identities = 119/161 (74%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| |||||||| ||| | ||| | ||| ||| |||| | |||||| | Sbjct 4190957 CGAGTTGCAGCCTACAATCTAAACTGAGGATGGATTTT-TGGAGCTAGCCCACCCTCGTG 4191015 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || |||| | | |||||||| ||||||| || ||||||||| || Sbjct 4191016 GGATCACGACCCTTTATCCTGGCCATTGTAGCACGTGTGTCACCTAGGCCATAAGGGGCA 4191075 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||||||||| ||||||||||||| || |||| Sbjct 4191076 TGATGACTTGACGTCATCTTCACCTTCCTCCGGCTTATCAC 4191116 >seq27476 Length=839 Score = 93.3 bits (102), Expect = 4e-17 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| Sbjct 339 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCA 280 Query 143 CCTTCCTCCGGTTTGTCAC 161 |||||||| || | |||| Sbjct 279 CCTTCCTCTAGTATCTCAC 261 >seq24 Length=5660502 Score = 93.3 bits (102), Expect = 4e-17 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| ||||||||||||||| ||||||||||| ||||||| Sbjct 625489 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTTATCCCCA 625548 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| || | |||| Sbjct 625549 CCTTCCTCCAGTATCTCAC 625567 >seq4 Length=9149724 Score = 87.8 bits (96), Expect = 1e-15 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 3 GAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||| ||||||||| ||| | ||| ||| || || | || |||||| || Sbjct 1111629 GAGTTGCAGCCTACAATCCAAACTGAGGATGGGTTTT-TGTAGTTTGGTCACCCTCGTGG 1111571 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| |||||||| |||| || |||| |||||||| ||| Sbjct 1111570 GATCACGACCCTTTGTCCCGTCCATTGTAGCACGTCTGTTGCCCAGGACATAAGGGGCAT 1111511 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGG 153 || ||||||||||||||| |||||||| |||| Sbjct 1111510 GATGACTTGACGTCATCCTCACCTTCCACCGG 1111479 >seq3 Length=9040196 Score = 86.0 bits (94), Expect = 5e-15 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||| || |||||||||| |||| | ||| || ||||||| |||| ||| Sbjct 1806054 CGAGTTGTAGCCTACAATCCGAACTAAGGACGGGTTTTTGTAGTTAGCTCACCCTTGCGA 1805995 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | | |||| ||| ||||| || |||| || |||| | ||||| || ||| Sbjct 1805994 GATAACAACCCTTTGTCCCAGCCATTATAGCACGTATGTCGCCCAAGGCATAAAGGTCAT 1805935 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||| || || |||| Sbjct 1805934 GATGACTTGACGTCATCCTCACCTTCCTTCGACTTATCAC 1805895 >seq388 Length=6020 Score = 77.0 bits (84), Expect = 3e-12 Identities = 113/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||| || ||||||||| |||| | ||| | | |||| | ||||| ||| Sbjct 659 CGAGTTGTAGCCTACAATCCAAACTAAGGACGGGTTTTTAGAGCTAGCCCACCCTCACGG 718 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | | |||| ||| |||||||| || |||| |||| |||||||| | | Sbjct 719 GATCACAACCCTTTGTCCCGGCCATTGTAGCACCTGTGTCGCCCAGGGCATAAGGGGCGT 778 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||| || || |||| Sbjct 779 GATGACTTGACGTCATCCTCACCTTCCTTCGACTTATCAC 818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415873200080