Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq31464 271 2e-70 seq30015 271 2e-70 seq29638 188 2e-45 seq26 183 7e-44 seq29881 176 1e-41 seq3 149 2e-33 seq82 134 3e-29 seq92 105 2e-20 seq48 102 2e-19 seq12 93.3 1e-16 seq62 82.4 2e-13 >seq31464 Length=156017 Score = 271 bits (300), Expect = 2e-70 Identities = 308/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 102825 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 102766 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 102765 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 102706 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 102705 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 102646 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 102645 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 102597 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | || || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 102596 TCCT-CAGCG-TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 102539 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 102538 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 102493 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 102492 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 102446 Score = 271 bits (300), Expect = 2e-70 Identities = 308/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 139527 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 139586 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 139587 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 139646 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 139647 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 139706 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 139707 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 139755 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | || || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 139756 TCCT-CAGCG-TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 139813 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 139814 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 139859 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 139860 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 139906 >seq30015 Length=1280 Score = 271 bits (300), Expect = 2e-70 Identities = 308/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 1239 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 1180 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1179 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 1120 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 1119 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 1060 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 1059 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 1011 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | || || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 1010 TCCT-CAGCG-TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 953 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 952 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 907 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 906 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 860 >seq29638 Length=1185 Score = 188 bits (208), Expect = 2e-45 Identities = 154/186 (83%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||| |||| ||| |||||||||| ||||||||| | || Sbjct 108 ACCCGTAGGCCTTCTACCTCCACGTGGCACTGCTCCATCAGGCTTTCGCCCATTGCGAAA 167 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||| Sbjct 168 AATTCCCCACTGCTGCCTCCCGTAGAAGTCTGGGCCCTGTCTCAGTTCTAGTGTGGCTGA 227 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCC-TAGGTGGGCCATTACCCCGCCAACTAG 189 |||||||||| ||||||||| |||| ||||| | ||| | ||| || ||||| || Sbjct 228 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTTGGTAAGTTATTGCCTTACCAACAAG 287 Query 190 CTAATC 195 |||||| Sbjct 288 CTAATC 293 >seq26 Length=4561837 Score = 183 bits (202), Expect = 7e-44 Identities = 128/146 (88%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 4561797 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 4561738 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||||||| |||||||||| |||||||||||| ||||||| Sbjct 4561737 GCGAAAAATTCCCCACTGCTGCCTCCCGCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 4561678 Query 125 GGCTGGTCATCCTCTCAGACCAGCTA 150 ||||| |||||||||| ||||||||| Sbjct 4561677 GGCTGATCATCCTCTCGGACCAGCTA 4561652 >seq29881 Length=1244 Score = 176 bits (194), Expect = 1e-41 Identities = 286/401 (71%), Gaps = 38/401 (9%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | | | ||||| ||| || ||| ||| |||||||| | || Sbjct 1137 ACCCGTAGGCCTTCTACCTTTAAGTGGCATTGCTCCAACAGACTTTCGCCCATTACGAAA 1078 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||| ||||||||||||||||||||||| | || ||||||||| |||||||||||| Sbjct 1077 AATTCCCAACTGCTGCCTCCCGTAGGAGTCTAGGCCCTGTCTCAGTCCCAGTGTGGCTGA 1018 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCC-TAGGTGGGCCATTACCCCGCCAACTAG 189 |||||||||| ||||||||| ||| | ||| | ||| || ||| || | |||||||| Sbjct 1017 TCATCCTCTCGGACCAGCTACTTATCATTGCCTTTGGTAAGCTATTGCCTCACCAACTAG 958 Query 190 CTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTG 249 |||||| | | | | ||| || | || ||| ||| |||| || | Sbjct 957 CTAATCAGA-CGCGAGCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGCTCCT- 911 Query 250 CGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTA-TCCCCCTCCATCAGGCA--GT 306 | || |||| ||||||||| || |||||| ||| ||||| |||| ||| | || Sbjct 910 CATCG-TATGGGGTATTAGCAGCCCTTTCCATCTCTTATTCCCCTTCCA--AGGGAAGGT 854 Query 307 TTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTT 366 || || | |||||||||||||| ||||| ||| ||| || || Sbjct 853 TTTTAAG-CCTTACTCACCCGTCCACCACT-------GAA-----AAG-----ACCACTT 812 Query 367 ACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCA 407 ||| |||||||||||||||| || || |||||||||||| Sbjct 811 CCCGCCCGACTTGCATGTGTTAAGCATGTCGCCAGCGTTCA 771 >seq3 Length=9040196 Score = 149 bits (164), Expect = 2e-33 Identities = 276/403 (68%), Gaps = 34/403 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || |||||||| ||||||||| | | || || |||| ||| ||||| | || || |||| Sbjct 1805186 TTCACAACCCGCAGGCCTTCTACCTCCATGCAGCATTGCTCCATCAAGATTTTGCTCATT 1805127 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || |||||| ||||||||| || |||||||||||| ||||||||||| ||||||| Sbjct 1805126 AAGGAAAATTCCCTACTGCTGCCACC-GTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGT 1805068 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||| || ||| | ||| |||| | || ||| | ||| || | ||| Sbjct 1805067 GGCTGATCATCCTTTCGGACTAACTATTGATCAT---CTTGGTAATCTATTGCCTCACCA 1805011 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| ||| || ||| ||| || Sbjct 1805010 ACTAGCTAATCAAACGCGAGCCCCTCCTCGGGTG-GA---------TTCCTCCTTTT--- 1804964 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 ||| | |||| | |||||| |||||| ||| ||||| ||||||| || | Sbjct 1804963 TCTCCTCAGTGTATGGGATATTAGTAGTCGTTTCTAGTTGTTATTCCCCTCCTAAGGGTA 1804904 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | ||||||||| || |||| || ||| || || || ||| Sbjct 1804903 GGTTCTTATGCGTTACTCACCTGTTCGCC------CATGGAAACACCA--CTTCTT---- 1804856 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCA 407 || |||||||||||||||| || |||| |||||||||| Sbjct 1804855 -----GTCCGACTTGCATGTGTTAAGCATGCCACCAGCGTTCA 1804818 >seq82 Length=1253720 Score = 134 bits (148), Expect = 3e-29 Identities = 134/174 (77%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 |||||||| |||||| || | || ||| ||||| |||||||||| ||| ||||||||| Sbjct 774864 CTTCTTCACTCACGCGATATTGTTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCAC 774923 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTC 140 | ||||| || || |||||| || |||||||||||| | ||||||| || |||||| Sbjct 774924 TACTGCCCCCTGTGGGAGTCCGGGCCGTGTCTCAGTCCTAGTGTGGTTGATCATCCGAAA 774983 Query 141 AGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 |||||||||| ||| | | || ||| ||| ||||| ||||| | ||||| Sbjct 774984 AGACCAGCTAAACATCATTGGCTTGGTCAGCCTTTACCTGACCAACGACCTAAT 775037 >seq92 Length=829607 Score = 105 bits (116), Expect = 2e-20 Identities = 113/148 (76%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 20 CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCA 79 ||||||||| |||||| || || ||| ||||| ||||||||| ||| ||||| | Sbjct 750619 CCTTCTTCACTCACGCGATATTATTGGATCGGGCTTTTGCCCATTGTCCAAGATTCCTTA 750560 Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 || || || ||||| |||||| | |||||||||||| ||||||||| || |||||| Sbjct 750559 CTACTACC-CCCGTGGGAGTCCGAGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCGAA 750501 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGT 167 |||||||||| | ||| | | || ||| Sbjct 750500 AAGACCAGCTAAGCATCATTGGCTTGGT 750473 >seq48 Length=2779969 Score = 102 bits (112), Expect = 2e-19 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 52 GCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTC 111 |||| ||||||||| ||| |||||||||||| ||| |||| ||||| || ||||||| Sbjct 1139346 GCTTTTGCCCATTGTCCAAGATTCCCCACTGCAGCCCTCCGTGGGAGTACGGGCCGTGTC 1139405 Query 112 TCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGC 171 ||||| |||||||||||| |||||| |||||| ||| | || | | || ||| || Sbjct 1139406 TCAGTCCCAGTGTGGCTGATCATCCAAAAAGACCATCTAAGCATTATTGGCTTGGTCAGC 1139465 Query 172 CATTAC 177 | |||| Sbjct 1139466 CTTTAC 1139471 >seq12 Length=6689851 Score = 93.3 bits (102), Expect = 1e-16 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||| | || |||| ||| ||||| ||| | Sbjct 5259044 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGTGATATTGCTGGATCGGGCTTTCGCAC 5259103 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| | ||| ||||| || |||||||||| |||| Sbjct 5259104 ATTGTCCAAGATTCCCCACTGCTGCCCCTCGTGGGAGTTCGGGTCGTGTCTCAGACCCAG 5259163 >seq62 Length=2056646 Score = 82.4 bits (90), Expect = 2e-13 Identities = 89/118 (75%), Gaps = 15/118 (13%) Strand=Plus/Plus Query 76 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATC 135 |||||||||||||||| ||||||| || ||| ||||| |||||||||||| | Sbjct 770407 CCCACTGCTGCCTCCC-----AGTCTGGGCCCTGTATCAGTCCCAGTGTGGCTG-----C 770456 Query 136 CTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAA 193 ||||||||||||||| |||| | |||| ||| | || | |||||||||||| Sbjct 770457 CTCTCAGACCAGCTACTGATCATTGCCTTGGT-----AAGGCCTCACCAACTAGCTAA 770509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222015384064