Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq31464 333 8e-89 seq29638 259 1e-66 seq30015 233 6e-59 seq29881 208 2e-51 seq3 197 4e-48 seq26 159 1e-36 seq92 152 2e-34 seq12 149 2e-33 seq82 125 2e-26 seq27758 105 2e-20 seq48 96.9 1e-17 seq62 82.4 2e-13 >seq31464 Length=156017 Score = 333 bits (368), Expect = 8e-89 Identities = 281/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 102628 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 102687 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 102688 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 102747 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 102748 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 102807 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 102808 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 102867 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 102868 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 102927 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 102928 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 102969 Score = 333 bits (368), Expect = 8e-89 Identities = 281/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 139724 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 139665 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 139664 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 139605 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 139604 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 139545 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 139544 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 139485 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 139484 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 139425 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 139424 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 139383 >seq29638 Length=1185 Score = 259 bits (286), Expect = 1e-66 Identities = 238/299 (80%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA-GGCGACGATCAGTAGCCGAC 219 |||||||||||||| |||||||||| || |||||||| ||||| |||||||||| | Sbjct 299 GCGTCTGATTAGCTTGTTGGTAAGGCAATAACTTACCAAAGGCGATGATCAGTAGCTGGT 240 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| | ||||||||||| || ||| ||| ||||||||||||| Sbjct 239 CCGAGAGGATGATCAGCCACACTAGAACTGAGACAGGGCCCAGACTTCTACGGGAGGCAG 180 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||||| |||| ||| |||| | || Sbjct 179 CAGTGGGGAATTTTTCGCAATGGGCGAAAGCCTGATGGAGCAGTGCCACGTGGAGGTAGA 120 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | | ||| | |||||||||| || ||| Sbjct 119 AGGCCTACGGGTCATGAACTTCTTTTCCCGAAGAAAAAGCAATGACGGTATCTGGGGAAT 60 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 456 |||| ||||||||| |||||||||||||||||||||| ||| || ||| |||||| Sbjct 59 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCCTTATCC 1 >seq30015 Length=1280 Score = 233 bits (258), Expect = 6e-59 Identities = 195/238 (82%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 1042 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 1101 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 1102 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 1161 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 1162 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 1221 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGA 395 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 1222 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGA 1279 >seq29881 Length=1244 Score = 208 bits (230), Expect = 2e-51 Identities = 215/279 (77%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA-GGCGACGATCAGTAGCCGA 218 |||||||||||||||||||||| ||| || ||||||||| ||| | ||| |||||| | Sbjct 945 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAAGGCAATGATAAGTAGCTGG 1004 Query 219 CCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA 278 | |||||| ||||| |||||| ||| ||||||||| || | | |||||||||||||||| Sbjct 1005 TCCGAGAGGATGATCAGCCACACTGGGACTGAGACAGGGCCTAGACTCCTACGGGAGGCA 1064 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATG 338 ||||| |||||| || | ||||||| |||| ||| || ||||| ||| | | | | | Sbjct 1065 GCAGTTGGGAATTTTTCGTAATGGGCGAAAGTCTGTTGGAGCAATGCCACTTAAAGGTAG 1124 Query 339 AAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAG 396 ||||||| |||||| | || ||| | | | ||||| ||||| |||| | ||| Sbjct 1125 AAGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGATGGTATCTAGGGAA 1184 Query 397 GAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATA 435 |||| ||||||||| || ||||||| |||||||||| Sbjct 1185 TAAGCATCGGCTAACTCTGTACCAGCAGTCGCGGTAATA 1223 >seq3 Length=9040196 Score = 197 bits (218), Expect = 4e-48 Identities = 252/343 (73%), Gaps = 7/343 (2%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 ||||| |||||||||||||||| ||| || | |||||||| | ||||| ||| Sbjct 1804993 CGCGTTTGATTAGCTAGTTGGTGAGGCAATAGATTACCAAG---ATGATCAATAGTTAGT 1805049 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | || ||| ||||| |||||| ||| ||||||||||| ||| |||||||| || ||||| Sbjct 1805050 CCGAAAGGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCCTAC-GGTGGCAG 1805108 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 |||| |||||| || | |||| |||||| | ||||| ||||| || || || | || Sbjct 1805109 CAGTAGGGAATTTTCCTTAATGAGCAAAATCTTGATGGAGCAATGCTGCATGGAGGTAGA 1805168 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| ||||| || || ||| | ||| ||||| ||||||| || | |||| Sbjct 1805169 AGGCCTGCGGGTTGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGATATCTAAGGAAT 1805228 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||| || |||||| |||| |||||| || ||||||| ||| || || |||||| | Sbjct 1805229 AAGTATCGACTAACTTTGTGCTAGCAGCTGCTGTAATACAGAGGATGCAAGTGTTATCTG 1805288 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | | || |||| | |||||||| || ||||||| Sbjct 1805289 GAATGA-TTGAGCACAAAGTATCTGTAGGTGGCTTTTTAAGTC 1805330 >seq26 Length=4561837 Score = 159 bits (176), Expect = 1e-36 Identities = 126/151 (83%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 207 ATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTC 266 ||||||||| | | |||||| ||||| |||||| ||| |||||||||||| ||| |||| Sbjct 4561647 ATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTC 4561706 Query 267 CTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCC 326 || ||||||||||||||||||||| || | |||||||| ||||||||| | ||||| ||| Sbjct 4561707 CTGCGGGAGGCAGCAGTGGGGAATTTTTCGCAATGGGCGAAAGCCTGACGGAGCAATGCC 4561766 Query 327 GCGTGAGCGATGAAGGCCTTCGGGTCGTAAA 357 ||||| | |||||||| |||||||| || Sbjct 4561767 GCGTGGAGGTAGAAGGCCTACGGGTCGTGAA 4561797 >seq92 Length=829607 Score = 152 bits (168), Expect = 2e-34 Identities = 197/267 (74%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285 || ||||| ||||| ||| |||||||||||| | ||||| ||||| || || ||| Sbjct 750504 GGATGATCAACCACACTGGGACTGAGACACGGCTCGGACTCCCACGGG-GGTAGTAGTAA 750562 Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG--C 343 ||||| ||| |||||||||||||||| ||| || || |||||||| || ||||| Sbjct 750563 GGAATCTTGGACAATGGGCAAAAGCCCGATCCAATAATATCGCGTGAGTGAAGAAGGGCA 750622 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 || | | |||| ||||| || || | ||| || || | ||| |||| ||||||| Sbjct 750623 CTGCCAATTGTAAGGCTCTTTCGTCGTGTGCGATCATAACAGAACTCGAGGCAGAAGCCC 750682 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||| | |||||||||| || |||| ||| || |||| || ||| | |||||| Sbjct 750683 TAGCTAACTCCATGCCAGCAGCTGCAGTAAGACG-AGAGGGCAAGTGTTCTTCGGAATGG 750741 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 || ||||||||| || ||||| ||| Sbjct 750742 CT-GGGCGTAAAAGGCATGTAGGCGGT 750767 >seq12 Length=6689851 Score = 149 bits (164), Expect = 2e-33 Identities = 187/252 (74%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 247 CTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAA 306 |||||||||| || |||||| ||| | |||||||||||||||| ||| |||||| || | Sbjct 5259157 CTGAGACACGACCCGAACTCCCACGAGGGGCAGCAGTGGGGAATCTTGGACAATGTGCGA 5259098 Query 307 AAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--TTCGGGTCGTAAAGCTCTGT 364 ||||| ||| |||||| | |||||| || ||||| | | | | | |||||||||| | Sbjct 5259097 AAGCCCGATCCAGCAATATCACGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTT 5259038 Query 365 CCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGC 422 |||| | | ||| |||| | ||| ||||| || ||| ||||||||| ||| || Sbjct 5259037 CCTCGAGTGCGCGATCATGATAGGACTCGAGGAAGATGCCTCGGCTAACTCTGTGTCAAT 5258978 Query 423 AGCCGCGGTAATAC----GTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGG 478 |||||| |||| || | ||||||| || || | |||| ||| ||||||||||| Sbjct 5258977 AGCCGC-GTAAGACGGGGGGAGGGGGCAAGTATTCTTTAGAATGACT-GGGCGTAAAGGA 5258920 Query 479 TGCGTAGGTGGT 490 ||||||||| Sbjct 5258919 CATGTAGGTGGT 5258908 >seq82 Length=1253720 Score = 125 bits (138), Expect = 2e-26 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| | |||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 775037 ATTAGGTCGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGTTTAGCTGGTCTTTTCGG 774978 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| ||||| | | |||||||||||| || ||||| || || ||||| ||||||| Sbjct 774977 ATGATCAACCACACTAGGACTGAGACACGGCCCGGACTCCCACAGGGGGCAGTAGTGGGG 774918 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAG 341 ||| ||| ||||||||| |||||| ||| || ||| |||||||| || |||| Sbjct 774917 AATCTTGGACAATGGGCGAAAGCCCGATCCAACAATATCGCGTGAGTGAAGAAG 774864 >seq27758 Length=872 Score = 105 bits (116), Expect = 2e-20 Identities = 86/103 (83%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 871 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 812 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 811 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 770 >seq48 Length=2779969 Score = 96.9 bits (106), Expect = 1e-17 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| | || || | |||| |||| |||||| | | || ||| | || || Sbjct 1139488 ATTAGGTCATTAGTCACGTAAAGGCTGACCAAGCCAATAATGCTTAGATGGTCTTTTTGG 1139429 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| |||| ||| ||||||||| Sbjct 1139428 ATGATCAGCCACACTGGGACTGAGACACGGCCCGTACTCCCACGGAGGGCTGCAGTGGGG 1139369 Query 288 AATATTGCACAATGGGCAAAAGC 310 ||| ||| ||||||||||||||| Sbjct 1139368 AATCTTGGACAATGGGCAAAAGC 1139346 >seq62 Length=2056646 Score = 82.4 bits (90), Expect = 2e-13 Identities = 89/118 (75%), Gaps = 15/118 (13%) Strand=Plus/Minus Query 169 TTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGG 228 ||||||||||||| ||| ||||||||||| | |||||||||| | |||||||| Sbjct 770509 TTAGCTAGTTGGTGAGGC-----CTTACCAAGGCAATGATCAGTAGCTGGTCTGAGAGG- 770456 Query 229 TGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | |||||| ||| ||||| ||| || ||| ||| |||||||||||||||| Sbjct 770455 ----CAGCCACACTGGGACTGATACAGGGCCCAGACT-----GGGAGGCAGCAGTGGG 770407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497128795136