Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq31464 277 4e-72 seq27758 277 4e-72 seq3 188 2e-45 seq18 143 6e-32 seq388 125 2e-26 seq22168 118 3e-24 seq92 109 1e-21 >seq31464 Length=156017 Score = 277 bits (306), Expect = 4e-72 Identities = 306/405 (76%), Gaps = 2/405 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 102860 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 102919 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 102920 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 102979 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 102980 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 103039 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||||||||||||||||| || | | |||||||| |||||| Sbjct 103040 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 103099 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| ||||||| ||||||| || ||||| Sbjct 103100 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 103159 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| ||||||||||||| |||||||| | | | ||| || | Sbjct 103160 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 103218 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 103219 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 103263 Score = 277 bits (306), Expect = 4e-72 Identities = 306/405 (76%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 139492 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 139433 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 139432 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 139373 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 139372 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 139313 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||||||||||||||||| || | | |||||||| |||||| Sbjct 139312 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 139253 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| ||||||| ||||||| || ||||| Sbjct 139252 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 139193 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| ||||||||||||| |||||||| | | | ||| || | Sbjct 139192 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 139134 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 139133 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 139089 >seq27758 Length=872 Score = 277 bits (306), Expect = 4e-72 Identities = 301/397 (76%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 871 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 812 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || ||||||| | || ||| | | || Sbjct 811 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGG 752 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 751 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 692 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 691 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 632 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 631 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 572 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | ||| Sbjct 571 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAGTG 513 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 512 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 476 >seq3 Length=9040196 Score = 188 bits (208), Expect = 2e-45 Identities = 278/391 (71%), Gaps = 2/391 (1%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 || |||||| |||| |||||| || ||||||| ||| || || |||||| ||||| | Sbjct 1805235 CGACTAACTTTGTGCTAGCAGCTGCTGTAATACAGAGGATGCAAGTGTTATCTGGAATGA 1805294 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 || || |||| | |||||||| || ||||||| | || ||| | | | |||||| Sbjct 1805295 TTGAGCACAAAGTATCTGTAGGTGGCTTTTTAAGTCCGCCGTTAAATCCCAGGACTCAAC 1805354 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 || || || | |||||| | ||| |||| | ||||||| |||||| | Sbjct 1805355 CCTGGACAGGCGATGGAAACTACTAAGCTGGAGTATGGTAGGGGCAGAGGGAATTTTCGG 1805414 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258 || ||| ||||||| |||| || | |||||||| | |||| || |||||| Sbjct 1805415 TGGAGCAATGAAATGTATAGAGATCGAAAAGAACACCAACGACGAAAGCACTCTGCTGGG 1805474 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 || |||||||||||| ||||||| |||||||||| |||||||||||||| |||| Sbjct 1805475 TTGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGATACCCTAGTAG 1805534 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTGCCGCAG 377 ||| | |||||| |||| |||||||||| | | || || || | | |||| | || Sbjct 1805535 TCCTAGTCGTAAATGATGGATACTAGGTG-CTGTGCATATCAACCCATGCAGTGCTGTAG 1805593 Query 378 CAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||||| ||||||| || | ||||||||| Sbjct 1805594 CTAACGCGTTAAGTATCCCGCATGGGGAGTA 1805624 >seq18 Length=5997143 Score = 143 bits (158), Expect = 6e-32 Identities = 187/256 (73%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 154 GAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATG 213 |||||| | ||| |||| | | ||| ||| |||||| ||| |||||||||||| Sbjct 4191640 GAAACTACCAAGCTGGAGTACGGTAGGAGCAGAGGGAATTTTCGGTGGAGCGGTGAAATG 4191581 Query 214 CGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTG 273 |||||| || | | |||||||| |||||| || |||||| | |||||||||| Sbjct 4191580 CGTAGAGATCGGAAAGAACACCAACGGCGAAAGCCCTCTGCTGGGTCGACACTGACACTG 4191521 Query 274 AGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACG 333 || |||||| |||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 4191520 AGAGATGAAAGCTAGGGGAGCAAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACG 4191461 Query 334 ATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTA 392 ||| |||||||| | | | ||| || | | |||||| | ||| || || |||||| Sbjct 4191460 ATGGATACTAGGCG-CTGTGCGTATCGACCCATGCGGTGCTGTAGCTAAGGCGTTAAGTA 4191402 Query 393 TTCCACCTGGGGAGTA 408 | | | ||||||||| Sbjct 4191401 TCCTGCATGGGGAGTA 4191386 >seq388 Length=6020 Score = 125 bits (138), Expect = 2e-26 Identities = 186/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 82 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCC 141 ||| ||||| || || |||| || |||||| | || ||| | | |||||||||| Sbjct 1416 GGCATAAAGCGTCTATATGTGGCTTTTTAAGTGCGCCGTCAAATCCCAGGGCTCAACCCT 1357 Query 142 GGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGT 201 || || | |||||| | ||| |||| | | ||||| | |||||| | ||| Sbjct 1356 GGACAGGCAGTGGAAACTACCAAGCTGGAGTACGGTAGGGGGAGAGGGAATTTCCGGTGG 1297 Query 202 AGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTG 261 |||||| |||||| |||| || || | |||||||| |||||| || || || | Sbjct 1296 AGCGGTAAAATGCATAGAGATCAGAAAGAACACCAACGGCGAAAGCACTCTGTTGAGCCA 1237 Query 262 TAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 |||||| |||| |||||| ||| ||| || ||||||||||||| ||||||| Sbjct 1236 ACGCTGACATTGAGAGACGAAAGTTAGGGTAGCGAATGGGATTAGATACCCCAGTAGTCC 1177 Query 322 ACGCCGTAAACGATGAATACTAGG 345 ||||||||||||| |||||||| Sbjct 1176 TAGCCGTAAACGATGGATACTAGG 1153 >seq22168 Length=497 Score = 118 bits (130), Expect = 3e-24 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 ||||||||| | |||||| |||||||| || |||| | | ||||| ||| ||||| Sbjct 245 AGTGGAATTTCGTGTGTAGGGGTGAAATCCGAAGATCTACGAAGGAAGGCCAAAAGCGAA 186 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 ||| || ||||| || ||| ||| || ||||||| |||||||| ||| || || Sbjct 185 GGCAACTCTCTGGATCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGGGTT 126 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||||||||||| |||||||| ||||| Sbjct 125 AGATACCCTGGTAGTCCATGCCGTAAATGATGA 93 >seq92 Length=829607 Score = 109 bits (120), Expect = 1e-21 Identities = 229/337 (68%), Gaps = 11/337 (3%) Strand=Plus/Plus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| |||| ||||||| ||||||| | |||||||||| || |||| ||| || |||| Sbjct 750666 ACTCGAGGCAGAAGCCCTAGCTAACTCCATGCCAGCAGCTGCAGTAAGACG-AGAGGGCA 750724 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||| || ||||| ||| ||| | | || Sbjct 750725 AGTGTTCTTCGGAATGGCTGGGCGTAAAAGGCATGTAGGCGGTGAATTAGGATGAAAGTT 750784 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 ||| | | | || | | ||| | || | ||||| | || || |||| Sbjct 750785 CAAGTC---GCCAAAAACTGGTGGAATTCTCTCGAAACCCATTCA---CTTAAGTGAGAT 750838 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| ||||||| | |||| | | ||||| | Sbjct 750839 AGAGGAGAGTGGAATTTCGTGTGTAGGTGTGAAATCTGAAGATCTACGAAGGAAGGATAA 750898 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 | ||||| ||| || | | || ||||||| || | ||||| ||||||| || Sbjct 750899 AAGTGAAGGTAGCTCTCTAGGTTCCTACCGACACTGGGGTACAAAAGCATGGGGAGAGAA 750958 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA 334 || ||| ||||| |||||||||||| | ||||||||| Sbjct 750959 CAAGATAAGATAGCCTGGTAGTCCATGTCGTAAACGA 750995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202821425152