Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq31464 127 4e-27 seq30015 125 2e-26 seq26 114 3e-23 seq29638 102 2e-19 seq82 89.7 1e-15 seq29881 87.8 4e-15 seq44 73.4 8e-11 >seq31464 Length=156017 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 102896 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 102848 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||||| ||||| ||| ||||| Sbjct 102847 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 102795 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 102794 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 102735 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 102734 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 102675 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 102674 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 102636 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 139456 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 139504 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||||| ||||| ||| ||||| Sbjct 139505 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 139557 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 139558 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 139617 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 139618 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 139677 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 139678 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 139716 >seq30015 Length=1280 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 1247 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 1189 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 1188 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 1129 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 1128 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 1069 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 1068 GCCTCACCAACTAGCTAAT 1050 >seq26 Length=4561837 Score = 114 bits (126), Expect = 3e-23 Identities = 115/148 (78%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 4561805 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 4561747 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| ||||||||||||||| |||||| ||| ||||||||||| Sbjct 4561746 TCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGCAGGAGTCTGGGCCGTGTCTCAG 4561687 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | ||||||| || Sbjct 4561686 TCCCAGTGTGGCTGATCATCCTCTCGGA 4561659 >seq29638 Length=1185 Score = 102 bits (112), Expect = 2e-19 Identities = 160/229 (70%), Gaps = 20/229 (9%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAA-GCTCCCACACG 59 |||||||||||| |||||||||||||||||||| || ||| || ||| Sbjct 31 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGCT-------- 82 Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 |||| ||| |||||||||| | | |||||| ||||| ||| |||| Sbjct 83 -------TTTTCTTCGGG---AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTCCACG 131 Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179 | ||| |||| || ||| |||||| || ||||| ||||||||||||||||| Sbjct 132 TGGCACTGCTCCATCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTA 191 Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||| || ||||||||||| | ||||| || | ||||||| || Sbjct 192 GAAGTCTGGGCCCTGTCTCAGTTCTAGTGTGGCTGATCATCCTCTCGGA 240 >seq82 Length=1253720 Score = 89.7 bits (98), Expect = 1e-15 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165 |||| || |||||| | | | ||| || | || ||| |||||| |||| ||||| ||| Sbjct 774864 CTTCTTCACTCACGCGATATTGTTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCAC 774923 Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225 | ||||| || || ||||| || |||||||||||| | | ||||| || | ||| Sbjct 774924 TACTGCCCCCTGTGGGAGTCCGGGCCGTGTCTCAGTCCTAGTGTGGTTGATCATCCGAAA 774983 Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | ||| |||| | |||| ||| ||| ||||| || || ||||||| Sbjct 774984 AGACCAGCTAAACATCATTGGCTTGGTCAGCCTTTACCTGACCAACGACCTAAT 775037 >seq29881 Length=1244 Score = 87.8 bits (96), Expect = 4e-15 Identities = 109/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| |||| | | | | ||| |||||| Sbjct 1151 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTTAAGTGGCATTGCTCCAACAGACTT 1093 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| ||||| || ||||| ||||||||||||||||||||| | | || |||||||| Sbjct 1092 TCGCCCATTACGAAAAATTCCCAACTGCTGCCTCCCGTAGGAGTCTAGGCCCTGTCTCAG 1033 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | ||||||| || Sbjct 1032 TCCCAGTGTGGCTGATCATCCTCTCGGA 1005 >seq44 Length=3230653 Score = 73.4 bits (80), Expect = 8e-11 Identities = 124/178 (70%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| ||| || || ||||| || | |||||||| Sbjct 1810775 CCTTCTTCACTCACGCGATATTGCTGGATCAAGCTTTCACCCATTATCCTAGATTCCTCA 1810834 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| || | ||||||| | || ||||||||| ||| | || || || ||| Sbjct 1810835 CTGCTGCCCTCCATGGGAGTTTAGGCCATGTCTCAGTCCCAGTATGACTGA--TTTATCT 1810892 Query 225 ---CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | ||| |||| | |||| |||| ||| ||||| | || ||||||| Sbjct 1810893 GAAAAGACCAGCTAAGCATCATTGGCTTGGTGAGCCTTTACCTAATCAACGACCTAAT 1810950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068463712768