Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq128 107 3e-21 seq17 89.7 8e-16 seq109 77.0 5e-12 >seq128 Length=90697 Score = 107 bits (118), Expect = 3e-21 Identities = 93/113 (82%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| ||||| || ||| || |||| Sbjct 87288 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATTGCGCTTGGTTGAAAAGCCAGT 87231 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | ||| |||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 87230 GGCGCAAAGCTACCATGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATC 87178 >seq17 Length=6318978 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| || || ||| | | ||||||| ||||| || ||| || ||| Sbjct 5234766 GTACGAGAGGAATCGTTGA-TTC-GCACAATTGGTCATTGCGTTTGGTTGAAAAGCTAGT 5234823 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||||| | |||| ||||| | |||||||||||||||||||||||| | | Sbjct 5234824 GGCGCAAAGCTACCGTGTGCTTGATTACGATTGAACGCCTCTAAGTCAGAATCCAGACTA 5234883 Query 121 GAA 123 ||| Sbjct 5234884 GAA 5234886 >seq109 Length=408487 Score = 77.0 bits (84), Expect = 5e-12 Identities = 90/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 || |||||||| || ||| | | ||||||| ||| | || ||| || ||||| || Sbjct 307049 GACAGGAACCGTTGA-TTC-GCACAATTGGTCATTGAGCTTGGTTGAAAAGCCAGTGGCG 307106 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||| | |||||||||||| || || | ||| ||||||||||| | || |||| Sbjct 307107 TGAAGCTACCGTGTGCTGGATTATGACTAAATGTCTCCAAGTCAGAATCTAGGCTAGAA 307165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818950301696