Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq17 80.6 3e-13 seq3 80.6 3e-13 seq2 75.2 1e-11 >seq17 Length=15755 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||||||||||| || | |||||| |||| |||||||||||||| | | ||||| Sbjct 11933 CCAACAAAATAGGATCGAAA-TCCTATGACGTTATCCCATGCTAATGTATACAGAGCGTA 11991 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 11992 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 12029 >seq3 Length=39782674 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||||||||||| || | |||||| |||| |||||||||||||| | | ||||| Sbjct 21393985 CCAACAAAATAGGATCGAAA-TCCTATGACGTTATCCCATGCTAATGTATACAGAGCGTA 21394043 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 21394044 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 21394081 >seq2 Length=23174626 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72 |||||| |||||| | || |||||| | |||| |||||||||||||| | | |||| Sbjct 12485548 CCAACAGAATAGGATTG-ACATCCTATGCG-TTATCCCATGCTAATGTATACAG-CGTAG 12485492 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 12485491 GCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 12485455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198904460