Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq377 637 2e-180
seq3328 241 5e-61
seq2698 241 5e-61
seq3 241 5e-61
seq7 237 7e-60
seq4344 228 3e-57
seq4 215 2e-53
seq4256 187 1e-44
seq4226 123 1e-25
seq5 78.8 4e-12
>seq377
Length=621
Score = 637 bits (706), Expect = 2e-180
Identities = 471/547 (86%), Gaps = 12/547 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 78 TGTAAAGCTCTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 137
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 138 TTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 197
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 198 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 257
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC----CGGCCCCTCGGCCGGTGCACTCTTCTG 258
||| ||||||||| ||| | || ||| | | | ||||| |||||||| | |
Sbjct 258 GCACCCAGACTTGGACGCTGCTGATCACCTTGAGGTCTCCTCG---AGTGCACTCGACAG 314
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|| |||||||||||| | ||||| || ||||||||||| |||| || || | ||||
Sbjct 315 CGCACAGGCCAGCATCGGTTCGGGTGGCTGGATAAAGGCCGTAGGAACGTAGCTCTCTTC 374
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCG 376
|||| ||||||||||| |||| |||| |||| | |||| |||| |||||| || |
Sbjct 375 GGGGAGTGTTATAGCCTACGGTGCCATGCAGCCCAGCCGGACCGAGGACCGCGCCTTCGG 434
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436
||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct 435 GCTAGGATGCTGGCGTAATGGGTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCT 494
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
|||||||||||||||||||||||| |||||| | |||| |||||||||||||| |||||
Sbjct 495 AACATCTATGCGAGTGTTTGGGTGGTAAACCCATACGCGGAATGAAAGTGAACGTAGGTG 554
Query 497 GGAACCC---GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553
|||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 555 AGAACCCCCTTTGGGGGCGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 614
Query 554 AGAGCAT 560
|||||||
Sbjct 615 AGAGCAT 621
>seq3328
Length=34111
Score = 241 bits (266), Expect = 5e-61
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | |
Sbjct 8943 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTA 9002
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATC 519
||||||| | || || ||| ||| || || || ||| ||| ||||||||| |
Sbjct 9003 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCC 9058
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||| | |||| | | || || || |||| |||||| |||| ||||||||||||
Sbjct 9059 GACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAG 9118
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 9119 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 9178
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 9179 ATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 9222
Score = 187 bits (206), Expect = 1e-44
Identities = 147/176 (84%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
||||||||| ||||||| | |||| | | || || || |||| |||||| ||||
Sbjct 22769 GGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTC 22828
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 22829 GGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGG 22888
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||||| | ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 22889 AGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 22944
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 8556 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 8615
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 8616 TAAATACAGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 8675
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 8676 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 8720
>seq2698
Length=84112
Score = 241 bits (266), Expect = 5e-61
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | |
Sbjct 49535 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTA 49476
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATC 519
||||||| | || || ||| ||| || || || ||| ||| ||||||||| |
Sbjct 49475 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCC 49420
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||| | |||| | | || || || |||| |||||| |||| ||||||||||||
Sbjct 49419 GACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAG 49360
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 49359 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 49300
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 49299 ATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 49256
Score = 241 bits (266), Expect = 5e-61
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | |
Sbjct 82775 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTA 82716
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATC 519
||||||| | || || ||| ||| || || || ||| ||| ||||||||| |
Sbjct 82715 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCC 82660
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||| | |||| | | || || || |||| |||||| |||| ||||||||||||
Sbjct 82659 GACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAG 82600
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 82599 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 82540
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 82539 ATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 82496
Score = 219 bits (242), Expect = 2e-54
Identities = 210/264 (80%), Gaps = 9/264 (3%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | |
Sbjct 69585 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTA 69526
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATC 519
||||||| | || || ||| ||| || || || ||| ||| ||||||||| |
Sbjct 69525 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCC 69470
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||| | |||| | | || || || |||| |||||| |||| ||||||||||||
Sbjct 69469 GACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAG 69410
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 69409 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 69350
Query 640 GTTCTGGCGTGCAAATCGATCGTC 663
| ||| ||||||||||| |||||
Sbjct 69349 ATACTGACGTGCAAATCGTTCGTC 69326
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 49922 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 49863
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 49862 TAAATACAGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 49803
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 49802 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 49758
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 69972 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 69913
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 69912 TAAATACAGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 69853
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 69852 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 69808
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 83162 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 83103
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 83102 TAAATACAGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 83043
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 83042 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 82998
>seq3
Length=50312079
Score = 241 bits (266), Expect = 5e-61
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | |
Sbjct 35840184 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTA 35840125
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATC 519
||||||| | || || ||| ||| || || || ||| ||| ||||||||| |
Sbjct 35840124 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCC 35840069
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||| | |||| | | || || || |||| |||||| |||| ||||||||||||
Sbjct 35840068 GACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAG 35840009
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 35840008 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCG 35839949
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 35839948 ATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 35839905
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 35840571 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 35840512
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 35840511 TAAATACAGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 35840452
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 35840451 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 35840407
>seq7
Length=36358036
Score = 237 bits (262), Expect = 7e-60
Identities = 228/287 (79%), Gaps = 9/287 (3%)
Strand=Plus/Plus
Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG- 460
|| |||||||||||| ||||||||||||||||||| |||| | ||||||| |||||
Sbjct 1438680 AATCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGA 1438739
Query 461 TCAAACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACC 516
| |||||||| | || || ||| ||| | || || ||| ||| |||||||||
Sbjct 1438740 TTAAACCCGTAAGGCGCAAGGAAGCTGATTGACGG---GATCCCCCTGTG-GGGTGCACC 1438795
Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
||||||| | |||| | | || || || |||| |||||| |||| |||||||||
Sbjct 1438796 GCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGA 1438855
Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636
||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct 1438856 AAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCA 1438915
Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| | ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 1438916 GCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1438962
>seq4344
Length=2483
Score = 228 bits (252), Expect = 3e-57
Identities = 225/283 (80%), Gaps = 11/283 (4%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCAAAC 466
||||||||| |||||||||||||||||||||||| | ||||||| ||||| | ||||
Sbjct 577 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCAACGGGTGATTAAAC 518
Query 467 CCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC---GTGAGGGTGCACCATCGAC 522
|||| | || || ||| ||| || || || ||| ||| ||||||||| ||||
Sbjct 517 CCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCCCTGTG-GGGTGCACCGCCGAC 462
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 461 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAGATG 402
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 401 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 342
Query 643 CTGGCGTG-CAAATCGATCGTCAAATTTGGGTA-TAGGGGCGA 683
||| |||| ||||||| ||||| | ||||||| |||||||||
Sbjct 341 CTGACGTGACAAATCGTTCGTCTGACTTGGGTAGTAGGGGCGA 299
Score = 161 bits (178), Expect = 4e-37
Identities = 118/137 (86%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606
||||| |||||||| || | |||||||||||||||||||||| || ||| ||||| ||
Sbjct 140 TTGAGCAAGAGCATTTTTGGTAGGACCCGAAAGATGGTGAACTACGCTTGAGTAGGGCGA 81
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||||| ||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||
Sbjct 80 AGCCAGGGGAAACTCTGGTGGAGGCTCGAAGCGTTACTGACGTGCAAATCGTTCGTCAAA 21
Query 667 TTTGGGTATAGGGGCGA 683
||| || |||||||||
Sbjct 20 CTTGAGTGTAGGGGCGA 4
Score = 141 bits (156), Expect = 4e-31
Identities = 133/167 (80%), Gaps = 3/167 (2%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| | |||||| ||||||||||| |||||| ||||||||| |||| |||||||||||
Sbjct 993 TTCCAAGAGTCGGGTTGTTTGGGATTGCAGCCTAAAATGGGAGATAAACTTCTTCTAAAG 934
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
||||||||| || ||||||||| ||||||| || ||||||||||||| |||
Sbjct 933 CTAAATATTTATGGGAAACCGATAGCAAACAAGTACTACGAAGGAAAGATGAAAAGAACT 874
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGA-AAGGGAAGCG 199
||| |||||| ||||||| || |||||| ||||| ||| |||||
Sbjct 873 TTGAAAAGAGGGTTAAAA--GACTTGAAATCGTTGAGAAGAAAAGCG 829
>seq4
Length=35924511
Score = 215 bits (238), Expect = 2e-53
Identities = 220/283 (78%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|||||||||||| || |||||||||||||||| |||| | ||||||| ||||| |
Sbjct 6751810 CGGCCCGTCTTGAAATACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTT 6751751
Query 464 AACCCGT---GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCG 520
||||||| ||||| | ||| ||| | || | ||| | ||||||||| ||
Sbjct 6751750 AACCCGTAAGGCGCG--AGGAAGCTGATTAGCGG-GATCCCCCTTTGGGGTGCACCGCCG 6751694
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
||||| | |||| | | || || || |||| |||||| |||| |||||||||||||
Sbjct 6751693 ACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTCGGGACCCGAAAGA 6751634
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct 6751633 TGGTGAATTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 6751574
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| ||||||||||||||||
Sbjct 6751573 TACTGACGTGCAAATCGTTCGTCTGTCTTGGGTATAGGGGCGA 6751531
Score = 154 bits (170), Expect = 6e-35
Identities = 133/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 6752197 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 6752138
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| ||||||||||| | ||||||| | || ||||||||||||| ||||
Sbjct 6752137 TAAATACAGGCGAGAGACCGATAACAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 6752078
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||| | ||| || | ||||||||| | ||||||||||
Sbjct 6752077 TGAAAAGAGAATCAAAGAGTTCTTGAAATTGTCGGAAGGGAAGCG 6752033
>seq4256
Length=20900
Score = 187 bits (206), Expect = 1e-44
Identities = 147/176 (84%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
||||||||| ||||||| | |||| | | || || || |||| |||||| ||||
Sbjct 2303 GGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATTCCTGTC 2244
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 2243 GGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGG 2184
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||||| | ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 2183 AGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 2128
Score = 136 bits (150), Expect = 2e-29
Identities = 107/128 (84%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|| ||| |||| | |||||||||||||||||||| ||| | | | | ||||||||||||
Sbjct 10960 AGTATATATGTTAGTACCCGAAAGATGGTGAACTAAGCCCGGACAAGATGAAGCCAGAGG 10901
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||| | |||| ||||| |||||||||||||||||| || |||| |
Sbjct 10900 AAACTCTGGTGGAGGTCTGTAGCGATTCTGACGTGCAAATCGATCGTCAGATCCGGGTTT 10841
Query 676 AGGGGCGA 683
||||||||
Sbjct 10840 AGGGGCGA 10833
>seq4226
Length=17910
Score = 123 bits (136), Expect = 1e-25
Identities = 117/147 (80%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| ||| ||| || ||||| ||| |||| |||||| | | ||||| |||||||
Sbjct 3747 GAGTCGGTTTGCTTGAGAGTGCAGACTTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 3688
Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| | ||| |||||||||||| |||||||| |||| ||||| ||||||| |||||| |
Sbjct 3687 AT-GACCACGAGACCGATAGCACACAAGTACCGTGAGGGAAAGGTGAAAAGAACTTTGAA 3629
Query 159 AAGAGAGTTAAAAAGCACGTGAAATTG 185
|||||||| || || |||||||| ||
Sbjct 3628 GAGAGAGTTCAAGAGTACGTGAAACTG 3602
Score = 123 bits (136), Expect = 1e-25
Identities = 117/147 (80%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| ||| ||| || ||||| ||| |||| |||||| | | ||||| |||||||
Sbjct 15811 GAGTCGGTTTGCTTGAGAGTGCAGACTTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 15752
Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| | ||| |||||||||||| |||||||| |||| ||||| ||||||| |||||| |
Sbjct 15751 AT-GACCACGAGACCGATAGCACACAAGTACCGTGAGGGAAAGGTGAAAAGAACTTTGAA 15693
Query 159 AAGAGAGTTAAAAAGCACGTGAAATTG 185
|||||||| || || |||||||| ||
Sbjct 15692 GAGAGAGTTCAAGAGTACGTGAAACTG 15666
>seq5
Length=41956025
Score = 78.8 bits (86), Expect = 4e-12
Identities = 74/93 (80%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166
||||||||||||| |||| || | || |||||||||||| ||||| ||||||||||
Sbjct 11149692 AGAGACCGATAGCAAACAAATATCGCGAAGGAAAGATGAAAATGACTTT-GAAAGAGAGT 11149750
Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||| || | ||||||||| | |||||||||
Sbjct 11149751 CAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 11149783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079896482300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |