Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4825 266 8e-69 seq4826 248 2e-63 seq1670 248 2e-63 seq7 244 3e-62 seq5 226 7e-57 seq1 226 7e-57 seq1201 113 1e-22 seq6 111 4e-22 seq2 91.5 4e-16 seq4 78.8 2e-12 >seq4825 Length=155848 Score = 266 bits (294), Expect = 8e-69 Identities = 303/411 (74%), Gaps = 27/411 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 106934 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 106875 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106874 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 106815 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 106814 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 106755 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 106754 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 106695 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 106694 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 106641 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 106640 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 106598 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||||| |||||||| ||||| |||| || ||| ||||||||||||| Sbjct 106597 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 106547 Score = 266 bits (294), Expect = 8e-69 Identities = 303/411 (74%), Gaps = 27/411 (7%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 133107 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 133166 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 133167 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 133226 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 133227 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 133286 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 133287 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 133346 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 133347 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 133400 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 133401 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 133443 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||||| |||||||| ||||| |||| || ||| ||||||||||||| Sbjct 133444 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 133494 >seq4826 Length=244980 Score = 248 bits (274), Expect = 2e-63 Identities = 302/412 (73%), Gaps = 21/412 (5%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 88091 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 88150 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 88151 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 88210 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 88211 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 88264 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || || | | Sbjct 88265 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 88324 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 88325 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 88384 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 88385 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 88429 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 88430 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 88481 >seq1670 Length=24701 Score = 248 bits (274), Expect = 2e-63 Identities = 302/412 (73%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 23011 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 22952 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 22951 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 22892 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 22891 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 22838 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || || | | Sbjct 22837 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 22778 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 22777 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 22718 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 22717 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 22673 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 22672 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 22621 >seq7 Length=36358036 Score = 244 bits (270), Expect = 3e-62 Identities = 301/412 (73%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 11508135 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 11508076 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 11508075 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 11508016 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 11508015 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 11507962 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || || | | Sbjct 11507961 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 11507902 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 11507901 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 11507842 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| |||| |||||||||||||| | | Sbjct 11507841 ATCAAA---AGATAGGAGAGCACC------------CCTTATCCCGAAGTTACGGGGTCA 11507797 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 11507796 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 11507745 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||||| || |||| |||||||| ||||| |||||| ||||||| || ||||||| Sbjct 21688648 ATCGTTACGCCTTTTGTGCGGGTCGGAATTTACCTGACAAGAAATTTCGTTATCTTAGGA 21688707 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 | ||||| ||||||| ||||||| |||||| ||| | ||| Sbjct 21688708 CTGTTATGGTTACGGTCGCCGTTCACCGGGACTTTGGTCA 21688747 Score = 84.2 bits (92), Expect = 6e-14 Identities = 77/99 (78%), Gaps = 9/99 (9%) Strand=Plus/Plus Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC---------T 121 ||| ||| |||||| ||| |||||||||| || |||||||||||||| | | Sbjct 31205370 TTATGCCTTTCGTGTGGGTGGGAACTTACCTGATAAGGAATTTCGCTATCTTAAGGCTAT 31205429 Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160 || ||| |||| |||||||||| ||||||||||||||| Sbjct 31205430 TAAGACTATTATAGTTACGGCCGTCGTTTACCGGGGCTT 31205468 >seq5 Length=41956025 Score = 226 bits (250), Expect = 7e-57 Identities = 217/278 (78%), Gaps = 4/278 (1%) Strand=Plus/Plus Query 27 ATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCA 86 || || ||||||| ||| ||| ||||||| ||| ||||||||||| ||||||| Sbjct 30122930 ATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCG 30122989 Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 30122990 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCC 30123049 Query 147 GTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCCCATCAATTAACCTT 202 ||| |||||||||||| || ||| | | | || | ||| | || ||||| Sbjct 30123050 GTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTT 30123109 Query 203 CCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGT 262 ||||||| |||||||||||| ||| |||| | ||| || ||||| ||| |||||| Sbjct 30123110 CCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGT 30123169 Query 263 TTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||| ||||||||||| |||||||| || ||||| Sbjct 30123170 TTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 30123207 >seq1 Length=51465339 Score = 226 bits (250), Expect = 7e-57 Identities = 295/411 (72%), Gaps = 28/411 (7%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || |||||||||| ||| ||| ||||||| ||| |||||| Sbjct 16910756 GCATCTTCACAGACATGTCAATTTCACCGAGCCTCTCTCCGAGACAGTGCCTAGATCGTT 16910815 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| |||||| ||| ||||||||||| ||||||||||| ||||||||| ||| ||| Sbjct 16910816 ACGCCTTTCGTGTGGGTTGGAACTTACCC-ACAAGGAATTTAGCTACCTTATAACCATTA 16910874 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | |||||||||| |||| ||| |||||||| || ||| | | | || | ||| Sbjct 16910875 TAGTTACGGCCGTCGTTCACCAGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 16910934 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 16910935 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 16910994 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 16910995 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 16911048 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 16911049 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 16911091 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||||| |||||||| ||||| |||| || ||| ||||||||||||| Sbjct 16911092 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 16911142 Score = 205 bits (226), Expect = 2e-50 Identities = 180/224 (80%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || |||||||||| ||| ||| ||||||| ||| |||||| Sbjct 16930793 GCATCTTCACAGACATGTCAATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 16930852 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16930853 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 16930912 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 16930913 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 16930972 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232 | || |||||||||||| |||||||||||| ||| |||| Sbjct 16930973 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 16931016 Score = 194 bits (214), Expect = 4e-47 Identities = 199/258 (77%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 43973158 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 43973217 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 43973218 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTATCTTAGGACCGTTA 43973277 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||| ||| ||||||||||| || ||| | | | || | ||| Sbjct 43973278 TAGTTACGGCCGCTGTTCTCCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 43973337 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| || || ||| || ||| Sbjct 43973338 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCAT-GGT---CTTACGACTTT 43973393 Query 249 GCAGAGTGCTGTGTTTTT 266 || ||| |||||||||| Sbjct 43973394 GCGGAGAACTGTGTTTTT 43973411 Score = 179 bits (198), Expect = 9e-43 Identities = 129/149 (87%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 43971823 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 43971882 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43971883 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 43971942 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTC 161 | ||||||||||||||| ||||||| ||| Sbjct 43971943 TAGTTACGGCCGCCGTTCACCGGGGGTTC 43971971 >seq1201 Length=2040 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||||| || |||| |||||||| ||||| |||||| ||||||| || ||||||| Sbjct 328 ATCGTTACGCCTTTTGTGCGGGTCGGAATTTACCTGACAAGAAATTTCGTTATCTTAGGA 387 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 | ||||| ||||||| ||||||| |||||| ||| | ||| Sbjct 388 CTGTTATGGTTACGGTCGCCGTTCACCGGGACTTTGGTCA 427 >seq6 Length=36610139 Score = 111 bits (122), Expect = 4e-22 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73 |||||||||| || | ||||||||||| ||| || |||| || ||||||| Sbjct 19499322 CATCTTCACAAACATGTTTATTTCACTGAGCCTCTCTCCGAAACAGTGCTCAGATCGTTA 19499381 Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||| ||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 19499382 CGCCTTTCATGCGGGTCGGTACTTACCCGACAAGGAAATTCGCTACCTTAGGACCGTTA 19499440 Score = 111 bits (122), Expect = 4e-22 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73 |||||||||| || | ||||||||||| ||| || |||| || ||||||| Sbjct 19503287 CATCTTCACAAACATGTTTATTTCACTGAGCCTCTCTCCGAAACAGTGCTCAGATCGTTA 19503346 Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||| ||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 19503347 CGCCTTTCATGCGGGTCGGTACTTACCCGACAAGGAAATTCGCTACCTTAGGACCGTTA 19503405 Score = 78.8 bits (86), Expect = 2e-12 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| || | | ||| || ||||| ||| Sbjct 17134425 TTGACCTTCCGGCACTGGGCAGGCGTCAACCCCCATGCATGGTCTTACGACTTTGCGGAG 17134484 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 |||||||||| ||||||||||| |||||||| Sbjct 17134485 ACCTGTGTTTTTGGTAAACAGTCGCCCAGGCCTGGT 17134520 Score = 77.0 bits (84), Expect = 8e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 81 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACG 140 ||||||||||| ||||| |||||| |||||||||||||||||||| |||| |||||| Sbjct 7263768 CGTGCAGGTCGCTACTTATGCGACAAAGAATTTCGCTACCTTAGGACAGTTAGAGTTACG 7263827 Query 141 GCCGC 145 || || Sbjct 7263828 GCGGC 7263832 >seq2 Length=43913520 Score = 91.5 bits (100), Expect = 4e-16 Identities = 100/135 (74%), Gaps = 15/135 (11%) Strand=Plus/Minus Query 27 ATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCA 86 || || ||||||| ||| || |||||| ||| |||||||| || ||||||| Sbjct 25988655 ATGTCTATTTCACCGAGCTTCTCTCTGAGACAATGCCAG-ATCGTTACACCTTTCGTGCG 25988597 Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146 |||||||||||||||||| ||||| ||||||||| |||||||||||| Sbjct 25988596 GGTCGGAACTTACCCGACGAGGAA--------------GACCGTTATAGTTACGGCCGCC 25988551 Query 147 GTTTACCGGGGCTTC 161 ||| ||||||||||| Sbjct 25988550 GTTCACCGGGGCTTC 25988536 >seq4 Length=35924511 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 || ||| |||||||||| |||||||||||| ||| |||| | ||| || ||||| | Sbjct 35213276 AAGTAATCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGATTTTGCGG 35213217 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || |||||||||| |||||||||| || ||||| || ||||| Sbjct 35213216 AGACCTGTGTTTTTGGTAAACAGTCGTCCGGGTCTGGTCACTGCGACC 35213169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260739153792