Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq4226 98.7 5e-19
seq3328 75.2 5e-12
seq2698 75.2 5e-12
seq3 75.2 5e-12
>seq4226
Length=17910
Score = 98.7 bits (108), Expect = 5e-19
Identities = 84/102 (82%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| |||| | ||||| ||||||||||||||||||||
Sbjct 3964 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCAGCGAGCGAACAGGGAAGAGCCCAGCG 3905
Query 61 CCGAAT-CCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101
| |||| ||||| || || | | |||||| |||| ||||
Sbjct 3904 CTGAATCCCCCGGGCCTCGCTCG---GCGGGAAATGTAGCGT 3866
Score = 98.7 bits (108), Expect = 5e-19
Identities = 84/102 (82%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| |||| | ||||| ||||||||||||||||||||
Sbjct 16028 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCAGCGAGCGAACAGGGAAGAGCCCAGCG 15969
Query 61 CCGAAT-CCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101
| |||| ||||| || || | | |||||| |||| ||||
Sbjct 15968 CTGAATCCCCCGGGCCTCGCTCG---GCGGGAAATGTAGCGT 15930
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 16420 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 16362
>seq3328
Length=34111
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 8353 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 8411
>seq2698
Length=84112
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 50125 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 50067
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 70175 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 70117
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 83365 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 83307
>seq3
Length=50312079
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 35840774 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 35840716
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 37227976 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 37228034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230389575840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |