Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4825 484 2e-134 seq1 475 1e-131 seq2194 396 8e-108 seq2 210 7e-52 seq4826 197 4e-48 seq2339 197 4e-48 seq6 170 6e-40 seq9 125 2e-26 seq5 80.6 8e-13 seq3 80.6 8e-13 >seq4825 Length=155848 Score = 484 bits (536), Expect = 2e-134 Identities = 408/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 101838 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 101897 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 101898 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 101957 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 101958 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 102015 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 102016 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 102075 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 102076 CATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 102135 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 102136 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 102195 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 102196 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 102255 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 102256 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 102315 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 102316 CGGTGAATTCGTTCCCG 102332 Score = 484 bits (536), Expect = 2e-134 Identities = 408/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 138203 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 138144 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 138143 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 138084 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 138083 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 138026 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 138025 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 137966 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 137965 CATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 137906 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 137905 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 137846 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 137845 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 137786 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 137785 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 137726 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 137725 CGGTGAATTCGTTCCCG 137709 >seq1 Length=51465339 Score = 475 bits (526), Expect = 1e-131 Identities = 406/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 12123672 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 12123613 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 12123612 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 12123553 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| |||| | ||||||||| Sbjct 12123552 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCAATGCTGTCGTCAG 12123495 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 12123494 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 12123435 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 12123434 CATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 12123375 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 12123374 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 12123315 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 12123314 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 12123255 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 12123254 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 12123195 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 12123194 CGGTGAATTCGTTCCCG 12123178 Score = 426 bits (472), Expect = 5e-117 Identities = 396/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||| |||||||||| |||||||||||||| |||||| Sbjct 16945333 TACGTTCGCAAGAATGAAACTCAAAG-AATTGACGGGAGCCCGCACAAGCGGTAGAGCAT 16945391 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||| | |||| |||||||||||||||| ||||||| | || |||| Sbjct 16945392 GTGGTTTAATTTGTTGCAAAGCGAAGAACCTTACCAGGGTTTGACATGCCGCGAATCCTC 16945451 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | | ||||| ||||||| | |||| || Sbjct 16945452 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACAGAGGTGGTGCATGGCTATCGTTAG 16945509 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| | | || ||||||||||||||| |||| |||||||||||| | |||||||| Sbjct 16945510 CTCGTGCCATAAGGTGTTGGGTTAAGTCCTGCAATGAGCGCAACCCTCGTGTTTAGTTGC 16945569 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 16945570 CATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 16945629 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 16945630 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 16945689 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 16945690 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 16945749 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 16945750 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 16945809 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 16945810 CGGTGAATTCGTTCCCG 16945826 >seq2194 Length=21910 Score = 396 bits (438), Expect = 8e-108 Identities = 320/383 (84%), Gaps = 3/383 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 18121 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 18180 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 18181 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 18240 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGA-CAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 | || | ||||| | || |||||| |||| | ||||||| ||||||| |||||||| Sbjct 18241 TTGAAAGAGAGGGGTGCC-TTCGGGAACGCAGACT-ACAGGTGGTGCATGGCTGTCGTCA 18298 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||| Sbjct 18299 GCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTG 18358 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 |||||||| |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 18359 CCATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGA 18418 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | | Sbjct 18419 TGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGA 18478 Query 360 CAAAGGGCAGCGAAACCGCGAGG 382 ||||||| |||| |||||||| Sbjct 18479 CAAAGGGTCGCGATCCCGCGAGG 18501 >seq2 Length=43913520 Score = 210 bits (232), Expect = 7e-52 Identities = 194/243 (80%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 100 CTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAG 159 |||||||| | || ||||| || | ||||| | || |||||| || | |||| Sbjct 2279376 CTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAG 2279433 Query 160 GTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGC 219 ||| ||||||| |||| |||||||||| ||| || ||||||||||||||||||||||||| Sbjct 2279434 GTGGTGCATGGCTGTCATCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGC 2279493 Query 220 GCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGAC 279 |||| ||| | ||||||||||||||| | || || || || | |||||||||||| Sbjct 2279494 GCAATCCTCGTGTTTAGTTGCCATCATTGAATTTGGAACCCTGAACAGACTGCCGGTGAT 2279553 Query 280 AAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACAC 339 || ||||||||||||| || |||||||| ||||||||||||||||| | ||||| |||| Sbjct 2279554 AAGCCGGAGGAAGGTGAAGATGACGTCAAGTCATCATGCCCCTTATGCTCTGGGCGACAC 2279613 Query 340 ACG 342 ||| Sbjct 2279614 ACG 2279616 Score = 154 bits (170), Expect = 4e-35 Identities = 123/148 (83%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||| ||| || ||||||||||||||||||||| Sbjct 18168318 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAAC 18168377 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 ||| |||||||| | ||||||||||||||| |||| || || || | ||||||||| Sbjct 18168378 GAGTGCAACCCTCGTGTTTAGTTGCCATCATTGAGTTTGGAACCCTGAACAGACTGCCGG 18168437 Query 276 TGACAAACCGGAGGAAGGTGGGGACGAC 303 ||| || | |||||||||| || ||| Sbjct 18168438 TGATAAGCTCGAGGAAGGTGAAGATGAC 18168465 Score = 100 bits (110), Expect = 9e-19 Identities = 159/225 (71%), Gaps = 15/225 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| | |||| ||||||||||| |||||||| || ||||||||| || |||||| | Sbjct 30507997 TACGTTCACAAGAATGAAACTCAAATGAATTGACAGGAGCCCGCACAAACGATGGAGCGT 30507938 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||| ||| |||| |||||||| |||| | | ||||| | | | || Sbjct 30507937 GTGGTTTAATCCGATGCAAAGCGAAGAATCTTATTAGGCTTCGACATGC---AAATCGTC 30507881 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || || |||| | | | ||||| || || ||||| Sbjct 30507880 TTGAAAGAGAGGGATGCCTTT---GGGA-ATACGCATAGGTGGTGTAT-------GTCAG 30507832 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACC 225 ||| || | | | |||||| |||||| ||| |||| |||||| || Sbjct 30507831 CTCTTGCCATAAAATGTTGAGTTAAG-CCCACAACCAGCGCATCC 30507788 Score = 80.6 bits (88), Expect = 8e-13 Identities = 72/89 (81%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| ||||| |||||| ||||||| || |||||||||| | ||||||| |||||| Sbjct 17059328 CGCAAGAATGAAATTCAAAGAAATTGACAGG-ACCCGCACAAACACTGGAGCACGTGGTT 17059386 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACC 95 ||||| || |||| |||||| ||||| Sbjct 17059387 TAATTGGATGCAAAATGAAGAATTTTACC 17059415 Score = 77.0 bits (84), Expect = 1e-11 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 |||||||||| | | |||||||| | |||||| |||||||||| ||||||| ||| Sbjct 12582375 AGTTCGGATTATTATATGCAACTCAGGAACATGAAGTTGGAATCGCTTGTAATCGCGGAT 12582316 Query 470 CAGCATGCTACGGTGAATACGTTCC 494 |||||||| || ||||||||| || Sbjct 12582315 CAGCATGCCACAATGAATACGTACC 12582291 >seq4826 Length=244980 Score = 197 bits (218), Expect = 4e-48 Identities = 186/236 (79%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 124799 GACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 124740 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| | Sbjct 124739 GGCTGGGCCACACACGTGCTACAATGGCAATTACAACGGGAAGCAAGGCTGTAAGGCGGA 124680 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 124679 GCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 124621 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 |||||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 124620 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 124565 Score = 158 bits (174), Expect = 4e-36 Identities = 176/234 (75%), Gaps = 17/234 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 125423 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 125364 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 125363 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 125313 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| || || || | | ||||||| ||||||| || Sbjct 125312 -ACAACAAAACCTGTCCTTAATGGGATGGTACTTACTTTCATACAGGTGCTGCATGGCTG 125254 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 125253 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 125200 >seq2339 Length=7923 Score = 197 bits (218), Expect = 4e-48 Identities = 186/236 (79%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 961 GACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 1020 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| | Sbjct 1021 GGCTGGGCCACACACGTGCTACAATGGCAATTACAACGGGAAGCAAGGCTGTAAGGCGGA 1080 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 1081 GCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 1139 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 |||||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 1140 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 1195 Score = 158 bits (174), Expect = 4e-36 Identities = 176/234 (75%), Gaps = 17/234 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 337 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 396 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 397 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 447 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| || || || | | ||||||| ||||||| || Sbjct 448 -ACAACAAAACCTGTCCTTAATGGGATGGTACTTACTTTCATACAGGTGCTGCATGGCTG 506 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 507 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 560 >seq6 Length=36610139 Score = 170 bits (188), Expect = 6e-40 Identities = 156/192 (81%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| ||||||||| |||||| |||||||| | | || |||| Sbjct 19018736 GTGGTTTAATTCGATGCAAAGCGAAGAACTTTACCAGGGCTTGACATGC-CGGAATCCTC 19018678 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| ||| | ||||||| ||||||| ||||||||| Sbjct 19018677 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACACGGACACAGGTGGTGCATGGCTGTCGTCAG 19018620 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||| ||||||||||||||||||||||||| ||| | |||||||| Sbjct 19018619 CTCGTG-CGTAAGGTGTCGGGTTAAGTCCCGCAACGAGCGCAATCCTCGTGTTTAGTTGC 19018561 Query 241 CATCATTAAGTT 252 ||||||| |||| Sbjct 19018560 CATCATTGAGTT 19018549 Score = 87.8 bits (96), Expect = 5e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 264 GTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTT 323 || |||||||||||| || ||||||||||||| || |||||||| |||||||||||||| Sbjct 7324822 GTCGACTGCCGGTGATAAGCCGGAGGAAGGTGATGATGACGTCAAGTCATCATGCCCCTT 7324881 Query 324 ATGATTTGGGCTACAC 339 ||| ||||| |||| Sbjct 7324882 ATGCCCTGGGCGACAC 7324897 >seq9 Length=33682890 Score = 125 bits (138), Expect = 2e-26 Identities = 214/313 (68%), Gaps = 17/313 (5%) Strand=Plus/Plus Query 161 TGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCG 220 || |||| | ||||||| |||| ||| | | ||||| ||| |||||||| |||| ||||| Sbjct 373355 TGGTGCACGATTGTCGTTAGCTGGTGCCATAAGATGCTGGTTTAAGTCCTGCAATGAGCG 373414 Query 221 CAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACA 280 || ||| ||| || | || | | | || || || |||| || |||||||||| Sbjct 373415 TAATCCTCGTATTTAATTACTATTAGTGAATTTGGAACCCTAAACAGATTGCCGGTGAC- 373473 Query 281 AACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACA 340 |||| || ||| || |||| |||||||||| | | ||||| Sbjct 373474 --------GAAGTTGAGGATGATGTCA--------TGCCCCTTATTCACGAGACGACACA 373517 Query 341 CGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA 400 |||||||||||| ||| | ||| | || |||| || || || ||||||| Sbjct 373518 CGTGCTACAATGTCCAAGATAAATGTTCTTGATCCCGCAAGAGTGAGATAACTCCATAAA 373577 Query 401 GTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTA 460 ||| |||| ||||||||| || |||||||||| | |||||| ||| ||||||||| Sbjct 373578 CCTGTCCTCAATTCGGATTGCAGACTGCAACTCGGTTGCATGAAGTCGGAGTCGCTAGTA 373637 Query 461 ATCGTAGATCAGC 473 || || | ||||| Sbjct 373638 ATTGTGGTTCAGC 373650 Score = 87.8 bits (96), Expect = 5e-15 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||| | | || ||||||||||||||||||||||||||||||||| | ||||| Sbjct 24138150 CAGCTCGTGCCATAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGT 24138209 Query 238 TGCCATCATTAAGTTGGG 255 | ||||||| |||| || Sbjct 24138210 TATCATCATTGAGTTTGG 24138227 >seq5 Length=41956025 Score = 80.6 bits (88), Expect = 8e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 ||||||||||||| ||| || ||||||| ||||||||||||||||||||||| | |||| Sbjct 15506282 TCGTCAGCTCGTGCCGTAAGGTGTTGGGCTAAGTCCCGCAACGAGCGCAACCGTCAAGC 15506224 >seq3 Length=50312079 Score = 80.6 bits (88), Expect = 8e-13 Identities = 87/115 (76%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| ||| || | |||||||||| ||| ||| |||| ||||||||||||| | | Sbjct 49726020 GACTGCCATTGATAAGCTAGAGGAAGGTGAGGATGACATCAAGTCATCATGCCCCTGAGG 49725961 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAG 381 || ||||||| |||||||||| ||||||||| |||| ||||||| Sbjct 49725960 CCCTG----ACACACGCGCTACAATGGCGGGGACAAAGGGCCGCGATCCCGCGAG 49725910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503927416960