Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq4609 717 0.0
seq2698 699 0.0
seq3335 686 0.0
seq4226 562 1e-157
seq4256 493 4e-137
seq5 105 2e-20
seq6 102 3e-19
seq4826 78.8 3e-12
seq1670 78.8 3e-12
seq7 78.8 3e-12
>seq4609
Length=992
Score = 717 bits (794), Expect = 0.0
Identities = 442/471 (94%), Gaps = 3/471 (1%)
Strand=Plus/Minus
Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCG 132
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 992 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCGGCCCA 933
Query 133 CGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192
|||||||||||||||| |||| ||| | |||| | |||| |||||||||| || |||||
Sbjct 932 CGAAGGACCTTAACGCTAGAAGTTGGACTGTGAGGTCCAGCTCCGCTTCATCGAATAAGT 873
Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTAC 252
|||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 872 AAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTAC 816
Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312
||| | | ||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 815 ACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 756
Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 CGCTGATTTGGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 696
Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 636
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 635 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 576
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 575 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 525
>seq2698
Length=84112
Score = 699 bits (774), Expect = 0.0
Identities = 477/532 (90%), Gaps = 5/532 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 67558 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 67617
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 67618 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATT 67677
Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||||||| | || |||| | | ||| | || | ||| || ||||| ||||
Sbjct 67678 GGCCCGCAAGCGAGCCTTTGGTCTAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCACG 67735
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||
Sbjct 67736 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCAC 67795
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67796 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 67855
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 67856 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 67915
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67916 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 67975
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67976 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 68035
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 68036 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 68087
Score = 699 bits (774), Expect = 0.0
Identities = 477/532 (90%), Gaps = 5/532 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 80716 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 80775
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 80776 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATT 80835
Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||||||| | || |||| | | ||| | || | ||| || ||||| ||||
Sbjct 80836 GGCCCGCAAGCGAGCCTTTGGTCTAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCACG 80893
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||
Sbjct 80894 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCAC 80953
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80954 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 81013
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 81014 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 81073
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 81074 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 81133
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 81134 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 81193
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 81194 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 81245
Score = 690 bits (764), Expect = 0.0
Identities = 475/532 (89%), Gaps = 5/532 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 47485 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 47544
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 47545 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATT 47604
Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||||||| | || |||| | | ||| | || | ||| || ||||| ||||
Sbjct 47605 GGCCCGCAAGCGAGCCTTTGGTCTAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCACG 47662
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||
Sbjct 47663 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCAC 47722
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47723 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 47782
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 47783 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 47842
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 47843 ACAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 47902
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47903 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 47962
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||| |||||| | ||||
Sbjct 47963 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACTTTGCGTTAGCATC 48014
Score = 655 bits (726), Expect = 0.0
Identities = 450/503 (89%), Gaps = 5/503 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 61235 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 61294
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 61295 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATT 61354
Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||||||| | || |||| | | ||| | || | ||| || ||||| ||||
Sbjct 61355 GGCCCGCAAGCGAGCCTTTGGTCTAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCACG 61412
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||
Sbjct 61413 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCAC 61472
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61473 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 61532
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 61533 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 61592
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61593 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 61652
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61653 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 61712
Query 484 TCTTCACTTTGACATTCAGAGCA 506
|||||||||||||||||||||||
Sbjct 61713 TCTTCACTTTGACATTCAGAGCA 61735
>seq3335
Length=3421
Score = 686 bits (760), Expect = 0.0
Identities = 470/525 (90%), Gaps = 5/525 (1%)
Strand=Plus/Minus
Query 14 TCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAAC 73
|| ||| ||||||||||||||| |||| | ||||||||||||||||||| ||||||
Sbjct 1105 TCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAAC 1046
Query 74 AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGC 133
|||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||
Sbjct 1045 AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATTGGCCCGC 986
Query 134 GAAGGA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAG 191
| || |||| | | ||| | || | ||| || ||||| |||| || ||||
Sbjct 985 AAGCGAGCCTTTGGTCTAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCACGGAATAAG 928
Query 192 TaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCACTTATTCT 250
||||| |||| ||| ||||||||||||||||| ||||| | ||||||||||||| ||
Sbjct 927 TAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCACTTATCCT 868
Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 808
Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 CCCGCTGATTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 748
Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 747 CAGTGGGAATCTCATTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 688
Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 687 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCAC 628
Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 627 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 583
Score = 176 bits (194), Expect = 1e-41
Identities = 221/302 (73%), Gaps = 16/302 (5%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1400 CTTTTGGTCTACACGAGATTTCTGTTCTCGTTGAGCTCACCTTAGGACACCTGCGTTACC 1341
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
| |||||||||||||||||||||||||||||||||||||| ||||| || || | ||
Sbjct 1340 TTATAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACCATGTCTTCCACGAAGGTC 1281
Query 127 G-----GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCC--GCT 179
| | ||| |||| || ||||| || ||| |||| || |
Sbjct 1280 GAGCAAACTTGCGTTCACTCTTAGAGCAAGAAACTG--------AGAACAGTCCCCTTTT 1229
Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239
||| || |||| |||| || ||| |||||||| || || |||| | ||||
Sbjct 1228 TCACGGAATAAGCAAAATTACTTGAAGAGTAGTGGTTTTACAGGATCGCC-TCGCAGCTC 1170
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
|||| || ||| ||| || || ||||||||||||| |||||||||||||||||||||
Sbjct 1169 CCACCTAGGCTATACCACTTCAGCAATTTCACAAAGTCAGACTAGAGTCAAGCTCAACAG 1110
Query 300 GG 301
||
Sbjct 1109 GG 1108
>seq4226
Length=17910
Score = 562 bits (622), Expect = 1e-157
Identities = 460/560 (82%), Gaps = 38/560 (7%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| ||| | ||||||||||||||||||| |
Sbjct 514 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCCGAGCTCGCCTTAGGACACCTGCGTTACG 573
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 574 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC-----CCCGGAGC 628
Query 127 GGCCCGC-----------GAAGGACC-------TTAACGCCAGAAAATGGT------CGG 162
|| ||| || || || |||| |||||||| | |||
Sbjct 629 GGGACGCAGTCCTGGGAAGAGGGCCCAGGCTGCTTAAAGCCAGAAACGAGAGCCCGCCGG 688
Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222
| | | |||| ||| | | ||| | |||||||||| |||||||||||||||
Sbjct 689 GGGCTCGCCTTCCCGCCTCACCGGGTTAGTGAGGAAACGATAAGAGTAGTGGTATTTCAC 748
Query 223 TTGCG----CCGA--AACGG---CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAA 273
| ||| |||| | ||| ||||||||||||||||||| |||| ||| ||||||
Sbjct 749 TGGCGGCGCCCGACGAGCGGGGCCTCCCACTTATTCTACACCCCTCATGTCTCTTCACAG 808
Query 274 AGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGT 333
| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 809 TGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGT 868
Query 334 TCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCAT 393
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 869 TCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCAT 928
Query 394 TCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTAC 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 929 TCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTAC 988
Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 513
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 989 TCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCA 1048
Query 514 GAAATCACATTGCGTCAACA 533
||||||||||||||||||||
Sbjct 1049 GAAATCACATTGCGTCAACA 1068
>seq4256
Length=20900
Score = 493 bits (546), Expect = 4e-137
Identities = 290/301 (96%), Gaps = 0/301 (0%)
Strand=Plus/Plus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 577 GGCTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGTCAGACTAGAGTCAAGCTC 636
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 637 AACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 696
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 756
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 816
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 817 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCAT 876
Query 535 C 535
|
Sbjct 877 C 877
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||
Sbjct 138 CTTTTGCTCTACGCGAGGTTTCTGTCCTCACTGAGCTGGCCTTAGGACACCTGCGTTACC 197
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||||||| ||||||||| |||||||||| ||||||||||||
Sbjct 198 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTC 244
>seq5
Length=41956025
Score = 105 bits (116), Expect = 2e-20
Identities = 144/200 (72%), Gaps = 11/200 (6%)
Strand=Plus/Minus
Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300
||||||| |||| |||| | |||||||||||| ||||| || | ||||| | ||||
Sbjct 33007967 CACTTATCTTACATTTCTCCAATCATTTCACAAAATCGGATTATAATCAAGTTTAACAA- 33007909
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC------CTTGGCTGTGGTTTCGCT 354
|| ||| | |||||||| || | | || | ||| ||||| ||| |||
Sbjct 33007908 ---TTTTTTTATCATTGATTCCGTCACGTCTGTCTCTTAAGTCTTAACTGTGATTTTGCT 33007852
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||| ||| || ||||| | ||| || ||||||||||||| | ||||| |||||||
Sbjct 33007851 AGATAACAGACAGAGACAGAAG-AATTTCATTAATCCATTCATACACGTCAGTAATTAGC 33007793
Query 415 TGACGAGGCATTTGGCTACC 434
|||| || ||||| |||||
Sbjct 33007792 TGACTAGACATTTTACTACC 33007773
>seq6
Length=36610139
Score = 102 bits (112), Expect = 3e-19
Identities = 90/111 (81%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGC 237
||||| || ||||||||| |||| ||| ||||| ||||| | || || || | |||
Sbjct 2061014 TTCATGGAATAAGTAAAATAACGTTAAAAATAGTGATATTTTAGTTTCGTCGTCTCCGGC 2061073
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTC 288
|||||||||| |||||||| ||||||||||||||||||||||| | ||||
Sbjct 2061074 TCCCACTTATCCTACACCTGTCAAGTCATTTCACAAAGTCGGATTTAAGTC 2061124
>seq4826
Length=244980
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 88139 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 88198
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 88199 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 88244
>seq1670
Length=24701
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 22963 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 22904
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 22903 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 22858
>seq7
Length=36358036
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 11508087 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 11508028
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 11508027 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 11507982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635121085248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |