Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq4294 758 0.0
seq2698 601 1e-169
seq1554 601 1e-169
seq4578 513 4e-143
seq3 513 4e-143
seq3328 416 9e-114
seq4503 295 2e-77
seq4226 217 4e-54
seq2 179 1e-42
seq6 152 2e-34
>seq4294
Length=1395
Score = 758 bits (840), Expect = 0.0
Identities = 446/462 (97%), Gaps = 1/462 (0%)
Strand=Plus/Plus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 60
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 120
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
|||||||| ||||||||| |||| || | |||||||||||||||||||||||||||||||
Sbjct 121 CCCGTTGAAACCATGGTAAGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTG 180
Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282
|||||||| |||||||| |||||||||||||| ||| ||||||| ||||||||||||| |
Sbjct 181 AATGAACCGTCGCCGGCGCAAGGCCATGCGATCCGTGAAGTTATCATGAATCACCAAGAA 240
Query 283 GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTT 342
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 241 GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGTTTTC 300
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAA 402
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 301 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAA 360
Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 361 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACA 419
Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 461
>seq2698
Length=84112
Score = 601 bits (666), Expect = 1e-169
Identities = 444/511 (87%), Gaps = 9/511 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 74312 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 74370
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 74371 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 74430
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||
Sbjct 74431 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 74490
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 74491 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 74550
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295
| |||||| |||||| ||| |||||| |||||||| | | | | | | || |||
Sbjct 74551 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 74610
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||||
Sbjct 74611 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 74670
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||||||||| |||| || ||| |||||| |||| ||||||||||
Sbjct 74671 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 74729
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473
||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||||
Sbjct 74730 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 74789
Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||
Sbjct 74790 ATCTTTGAGACAAGCATATGACTACTGGCAG 74820
Score = 592 bits (656), Expect = 5e-167
Identities = 442/511 (86%), Gaps = 9/511 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 54653 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 54711
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54712 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 54771
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||
Sbjct 54772 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 54831
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 54832 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 54891
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295
| |||||| |||||| || |||||| |||||||| | | | | | | || |||
Sbjct 54892 CAAAGGCCGTGCGATCTGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 54951
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||||
Sbjct 54952 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 55011
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||||||||| |||| || ||| |||||| |||| ||||||||||
Sbjct 55012 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 55070
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473
||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||||
Sbjct 55071 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 55130
Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||| |||||||||
Sbjct 55131 ATCTTTGAGACAAGCATATGAATACTGGCAG 55161
>seq1554
Length=41206
Score = 601 bits (666), Expect = 1e-169
Identities = 444/511 (87%), Gaps = 9/511 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 23399 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 23457
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 23458 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 23517
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||
Sbjct 23518 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 23577
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 23578 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 23637
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295
| |||||| |||||| ||| |||||| |||||||| | | | | | | || |||
Sbjct 23638 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 23697
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||||
Sbjct 23698 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 23757
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||||||||| |||| || ||| |||||| |||| ||||||||||
Sbjct 23758 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 23816
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473
||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||||
Sbjct 23817 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 23876
Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||
Sbjct 23877 ATCTTTGAGACAAGCATATGACTACTGGCAG 23907
>seq4578
Length=1641
Score = 513 bits (568), Expect = 4e-143
Identities = 397/465 (85%), Gaps = 9/465 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 1513 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 1455
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1395
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||
Sbjct 1394 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 1335
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1334 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 1275
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295
| |||||| |||||| ||| |||||| |||||||| | | | | | | || |||
Sbjct 1274 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 1215
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| |
Sbjct 1214 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTGG 1155
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||||||||| |||| || ||| |||||| |||| | ||||||||
Sbjct 1154 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTAAAACTGATT 1096
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458
||||||||||||||||||||||| || | ||| | | |||||||
Sbjct 1095 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTA 1051
Score = 239 bits (264), Expect = 1e-60
Identities = 249/325 (77%), Gaps = 24/325 (7%)
Strand=Plus/Minus
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|| ||| || ||||| ||||||| |||||||||||||| ||||| || | | | |
Sbjct 1048 AGTCCAATACACTACCTTCGAAAGCTGATAGGGCAGAAACTTGAACGATTTACCAC--GT 991
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
| | || ||| | | |||||| ||||| |||||| | | |||
Sbjct 990 TTA----CACGCGGTCAGCCAAGTTACTATGATTCACCATGT-------------GATGG 948
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
|| ||||||||||| | || ||| ||| || ||| ||||||||||||||||
Sbjct 947 TTAA--ATCTAATAAATGCTACCATTCTTGCGTCCGGTATTTGCGCATGTATTAGCTCTA 890
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||||||||||||||||||| | | |||||||||||||| ||||||| |||||||
Sbjct 889 GAATTACCACGGTTATCCATGTAATTTGC-ACTATCAAATAAACTATAACTGTTTTAATG 831
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 830 AGCCATTCGCAGTTTCACTGTATACTAT--TTATACTTAGACATGCATGGCTTAATCTTT 773
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||| |||||||
Sbjct 772 AAGACAAGCATATGACTTCTGGCAG 748
>seq3
Length=50312079
Score = 513 bits (568), Expect = 4e-143
Identities = 397/465 (85%), Gaps = 9/465 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 35842723 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 35842781
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35842782 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 35842841
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||
Sbjct 35842842 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 35842901
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 35842902 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 35842961
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295
| |||||| |||||| ||| |||||| |||||||| | | | | | | || |||
Sbjct 35842962 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 35843021
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| |
Sbjct 35843022 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTGG 35843081
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| |||||||||| |||| || ||| |||||| |||| | ||||||||
Sbjct 35843082 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTAAAACTGATT 35843140
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458
||||||||||||||||||||||| || | ||| | | |||||||
Sbjct 35843141 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTA 35843185
Score = 172 bits (190), Expect = 2e-40
Identities = 160/199 (80%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 308 CTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366
||||||||| || | |||| ||||||||||||| | ||| |||||||||||||||||||
Sbjct 27164833 CTAATAAATGCATCTTTTCCCGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTAC 27164892
Query 367 CACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426
| ||||| |||| || || |||||| |||| |||||||||||||||||| |||
Sbjct 27164893 TGCAATTATCTGAGTAGCAAA-TATCATCAAACAAACTATAACTGATTTAATGAGCTATT 27164951
Query 427 CGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACA 485
| || ||||| || | ||| || ||||||| |||||||| |||||| | |||||||
Sbjct 27164952 CTCATTTTCATAGTCTGAATTAGTTCATACTTACACATGCATAACTTAATATATGAGACA 27165011
Query 486 AGCATATGACTACTGGCAG 504
| |||||||||||||||||
Sbjct 27165012 ATCATATGACTACTGGCAG 27165030
>seq3328
Length=34111
Score = 416 bits (460), Expect = 9e-114
Identities = 327/386 (85%), Gaps = 8/386 (2%)
Strand=Plus/Minus
Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185
|||||||||||||||||||||||||||||| |||| |||||| ||| | ||||||||
Sbjct 2938 GGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTAGGCCA 2879
Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAG 244
|||||||||||||||||||||||||||||||||||||||||| |||||||| | |||
Sbjct 2878 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCACAAAG 2819
Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCGTTGGT 300
||| |||||| ||| |||||| |||||||| | | | | | | || |||| |
Sbjct 2818 GCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCGTCGAC 2759
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||||||||
Sbjct 2758 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTA 2699
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||| |||||||||| |||| || ||| |||||| |||| |||||||||||||||
Sbjct 2698 GAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATTTAATG 2640
Query 420 AGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTT 478
|||||||||||||||||| || | ||| | | ||||||| |||||||||||||||||||
Sbjct 2639 AGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTT 2580
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 2579 TGAGACAAGCATATGACTACTGGCAG 2554
Score = 253 bits (280), Expect = 6e-65
Identities = 157/167 (94%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 6404 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 6346
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6345 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6286
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167
||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 6285 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGT 6239
>seq4503
Length=10536
Score = 295 bits (326), Expect = 2e-77
Identities = 235/280 (84%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||||| | || ||| |||| || |||| ||||| | ||||||||
Sbjct 617 GTACTCATTCCAATTACGGGGCCTCAATAGAGTCCCGTATTGTTATTTTTCGTCACTACA 676
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 677 TCCCCGTACTGGGATTGTGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 736
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 737 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACAACCATGGT 796
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| || ||||||||||| |||||||| ||||| |||| || ||||| ||||
Sbjct 797 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGTTGCTTGAGGGATACATCGTCGGC 856
Query 240 TCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCA 278
||| ||||||| ||||| | | ||||||| || ||| ||
Sbjct 857 TCAGAGGCCATACGATTTGCTCAGTTATTCAGAGTCATCA 896
Score = 196 bits (216), Expect = 1e-47
Identities = 140/160 (88%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404
||||||||||||||||||||||||| |||||||||||| || | | |||| | |||
Sbjct 1050 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAAAAAAGAA-TATCCGAGGAACC 1108
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
|||||||||||||||||||||||| |||||||| |||| | | | ||||||||||||
Sbjct 1109 GTAACTGATTTAATGAGCCATTCGCGGTTTCACTTTATAAACAGTATGTACTTAGACATG 1168
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||
Sbjct 1169 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1208
>seq4226
Length=17910
Score = 217 bits (240), Expect = 4e-54
Identities = 253/333 (76%), Gaps = 19/333 (6%)
Strand=Plus/Plus
Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCA 248
||||||||||| |||||||| |||||| ||||||| || | |||||||| | ||||||
Sbjct 6776 CCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGCACGAAGGCCG 6835
Query 249 TGCGATTCGTT--AAGTTATTATGAATCACCAAGG-AGCC-----CCGAAGGG--CGTTG 298
|||||| | |||||||| || ||||||| | || | ||||| || |
Sbjct 6836 TGCGATCAGCCCAAAGTTATTCAGAGTCACCAAAGTAGACGATGGCCGAAACCACCGATT 6895
Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTTTT--TAGCATGTATT 352
| |||| |||||||||| | |||||||| |||||| | | | |||||||||
Sbjct 6896 GGTTTTGATCTAATAAAAGCGTCCCTTCCGTCTCCGGTCGGGACTCTGTTGGCATGTATT 6955
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTG 411
||||| || ||| || | |||||||||||| | | |||| ||| | | ||| |||||||
Sbjct 6956 AGCTCCAGTATTTCCGCAGTTATCCATGTAACTGAAGTACGATCTATTGAACCATAACTG 7015
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471
|| ||||||||| | ||| ||||||| || | | |||| ||||||||||||||||||
Sbjct 7016 ATATAATGAGCCTTCCGCGGTTTCACCTTAATG-TGGCTTGCACTTAGACATGCATGGCT 7074
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||| ||||||||
Sbjct 7075 TAATCTTTGAGACAAGCATATGATAACTGGCAG 7107
>seq2
Length=43913520
Score = 179 bits (198), Expect = 1e-42
Identities = 228/308 (74%), Gaps = 17/308 (6%)
Strand=Plus/Minus
Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG---GCC 184
||||||| || ||||||||||||||| ||||||||| | ||||| |||| |||
Sbjct 3328018 CTCCCTCGCCAAAATCGAACCCTAATTATCCGTTACCCAT---CACCATCGTAGTAAGCC 3327962
Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA- 243
||||| |||||||| ||||||||| || ||||||||| ||||| |||||||| ||
Sbjct 3327961 ACTATGCTACCATCAAAAGTTGATGGGACAGAAATTTAAATGATGTGTCGCCGGCAAAAG 3327902
Query 244 GGCCATGCGATTCGTTAAGT----TATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295
|| | |||||| ||| ||| ||| |||||||| | | | | | | | || |
Sbjct 3327901 GGTCGTGCGATCCGTCGAGTTATATATCATGAATCATCGAAGCGACAGGCATAGCCTGTG 3327842
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | |||||| || ||||| || ||||||| ||||||||||||| | ||| ||||||
Sbjct 3327841 TCGACCTTTTATATACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACATATTAG 3327782
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
||| |||||||| || ||||||| ||| || || | ||| |||| ||||||||||
Sbjct 3327781 CTCAAGAATTACTACAGTTATCCGCATAGCAA-ATAGAAAAAAACAAACTATAACTGATT 3327723
Query 415 TAATGAGC 422
|| | |||
Sbjct 3327722 TAGTAAGC 3327715
>seq6
Length=36610139
Score = 152 bits (168), Expect = 2e-34
Identities = 239/331 (72%), Gaps = 17/331 (5%)
Strand=Plus/Minus
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
|||||||||||| |||||| |||||||| ||||| ||| | |||| | |||| |
Sbjct 2107804 TAGGCCACTATCATACCATTAAAAGTTGAATGGGCATAAAAT-GAATAATGTGTCGCTGT 2107746
Query 239 CTCAAGG--CCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCGA---AG 291
|| || || ||||||| |||| | |||| ||| | || || |||| ||
Sbjct 2107745 TAAAAAAAACCGTGTAATTCGTTGAGTTTTCATGA-TCATC---GAACCGACCGACAGAG 2107690
Query 292 GGCG--TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTT-TAGCATG 348
| | | | ||||||||||||||| || |||| | || ||||| | ||||
Sbjct 2107689 TCCCAATCGATCTTTTATCTAATAAATGTACTCCTTTCAAAAATTTAGTTTTGTTACATG 2107630
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408
||||||||| |||||||| || |||||| |||| || || ||||||| ||| ||||
Sbjct 2107629 TATTAGCTCCAGAATTACAACAGTTATCTGAGTAGCAAA-TAATATCAAACAAATAATAA 2107571
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCAT 467
||||||||||||| ||| | ||||| || || | ||| | | ||||||| |||| |||
Sbjct 2107570 TTGATTTAATGAGCTATTTGTAGTTTTACGGTTTGAATTACATCATACTTACACATCCAT 2107511
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTAC 498
| ||| |||||||||||| | ||||||||||
Sbjct 2107510 GACTTTATCTTTGAGACATGAATATGACTAC 2107480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510327108096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |