Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4294 758 0.0 seq2698 601 1e-169 seq1554 601 1e-169 seq4578 513 4e-143 seq3 513 4e-143 seq3328 416 9e-114 seq4503 295 2e-77 seq4226 217 4e-54 seq2 179 1e-42 seq6 152 2e-34 >seq4294 Length=1395 Score = 758 bits (840), Expect = 0.0 Identities = 446/462 (97%), Gaps = 1/462 (0%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 60 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 120 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 |||||||| ||||||||| |||| || | ||||||||||||||||||||||||||||||| Sbjct 121 CCCGTTGAAACCATGGTAAGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTG 180 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282 |||||||| |||||||| |||||||||||||| ||| ||||||| ||||||||||||| | Sbjct 181 AATGAACCGTCGCCGGCGCAAGGCCATGCGATCCGTGAAGTTATCATGAATCACCAAGAA 240 Query 283 GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTT 342 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 241 GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGTTTTC 300 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAA 402 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 301 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAA 360 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 361 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACA 419 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 461 >seq2698 Length=84112 Score = 601 bits (666), Expect = 1e-169 Identities = 444/511 (87%), Gaps = 9/511 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 74312 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 74370 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74371 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 74430 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||| Sbjct 74431 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 74490 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 74491 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 74550 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| ||| |||||| |||||||| | | | | | | || ||| Sbjct 74551 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 74610 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||| Sbjct 74611 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 74670 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| |||| || ||| |||||| |||| |||||||||| Sbjct 74671 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 74729 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473 ||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||||| Sbjct 74730 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 74789 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 74790 ATCTTTGAGACAAGCATATGACTACTGGCAG 74820 Score = 592 bits (656), Expect = 5e-167 Identities = 442/511 (86%), Gaps = 9/511 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 54653 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 54711 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54712 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 54771 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||| Sbjct 54772 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 54831 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 54832 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 54891 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| || |||||| |||||||| | | | | | | || ||| Sbjct 54892 CAAAGGCCGTGCGATCTGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 54951 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||| Sbjct 54952 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 55011 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| |||| || ||| |||||| |||| |||||||||| Sbjct 55012 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 55070 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473 ||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||||| Sbjct 55071 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 55130 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| ||||||||| Sbjct 55131 ATCTTTGAGACAAGCATATGAATACTGGCAG 55161 >seq1554 Length=41206 Score = 601 bits (666), Expect = 1e-169 Identities = 444/511 (87%), Gaps = 9/511 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 23399 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 23457 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23458 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 23517 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||| Sbjct 23518 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 23577 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 23578 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 23637 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| ||| |||||| |||||||| | | | | | | || ||| Sbjct 23638 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 23697 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||| Sbjct 23698 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 23757 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| |||| || ||| |||||| |||| |||||||||| Sbjct 23758 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATT 23816 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473 ||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||||| Sbjct 23817 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 23876 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 23877 ATCTTTGAGACAAGCATATGACTACTGGCAG 23907 >seq4578 Length=1641 Score = 513 bits (568), Expect = 4e-143 Identities = 397/465 (85%), Gaps = 9/465 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 1513 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 1455 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1454 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1395 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||| Sbjct 1394 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 1335 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1334 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 1275 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| ||| |||||| |||||||| | | | | | | || ||| Sbjct 1274 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 1215 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| | Sbjct 1214 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTGG 1155 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| |||| || ||| |||||| |||| | |||||||| Sbjct 1154 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTAAAACTGATT 1096 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458 ||||||||||||||||||||||| || | ||| | | ||||||| Sbjct 1095 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTA 1051 Score = 239 bits (264), Expect = 1e-60 Identities = 249/325 (77%), Gaps = 24/325 (7%) Strand=Plus/Minus Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || ||| || ||||| ||||||| |||||||||||||| ||||| || | | | | Sbjct 1048 AGTCCAATACACTACCTTCGAAAGCTGATAGGGCAGAAACTTGAACGATTTACCAC--GT 991 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 | | || ||| | | |||||| ||||| |||||| | | ||| Sbjct 990 TTA----CACGCGGTCAGCCAAGTTACTATGATTCACCATGT-------------GATGG 948 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 || ||||||||||| | || ||| ||| || ||| |||||||||||||||| Sbjct 947 TTAA--ATCTAATAAATGCTACCATTCTTGCGTCCGGTATTTGCGCATGTATTAGCTCTA 890 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||| | | |||||||||||||| ||||||| ||||||| Sbjct 889 GAATTACCACGGTTATCCATGTAATTTGC-ACTATCAAATAAACTATAACTGTTTTAATG 831 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 830 AGCCATTCGCAGTTTCACTGTATACTAT--TTATACTTAGACATGCATGGCTTAATCTTT 773 Query 480 GAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||| ||||||| Sbjct 772 AAGACAAGCATATGACTTCTGGCAG 748 >seq3 Length=50312079 Score = 513 bits (568), Expect = 4e-143 Identities = 397/465 (85%), Gaps = 9/465 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 35842723 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 35842781 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35842782 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 35842841 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||| Sbjct 35842842 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTA 35842901 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 35842902 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCA 35842961 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| ||| |||||| |||||||| | | | | | | || ||| Sbjct 35842962 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCG 35843021 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| | Sbjct 35843022 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTGG 35843081 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| |||| || ||| |||||| |||| | |||||||| Sbjct 35843082 CTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTAAAACTGATT 35843140 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458 ||||||||||||||||||||||| || | ||| | | ||||||| Sbjct 35843141 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTA 35843185 Score = 172 bits (190), Expect = 2e-40 Identities = 160/199 (80%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 308 CTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366 ||||||||| || | |||| ||||||||||||| | ||| ||||||||||||||||||| Sbjct 27164833 CTAATAAATGCATCTTTTCCCGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTAC 27164892 Query 367 CACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426 | ||||| |||| || || |||||| |||| |||||||||||||||||| ||| Sbjct 27164893 TGCAATTATCTGAGTAGCAAA-TATCATCAAACAAACTATAACTGATTTAATGAGCTATT 27164951 Query 427 CGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 | || ||||| || | ||| || ||||||| |||||||| |||||| | ||||||| Sbjct 27164952 CTCATTTTCATAGTCTGAATTAGTTCATACTTACACATGCATAACTTAATATATGAGACA 27165011 Query 486 AGCATATGACTACTGGCAG 504 | ||||||||||||||||| Sbjct 27165012 ATCATATGACTACTGGCAG 27165030 >seq3328 Length=34111 Score = 416 bits (460), Expect = 9e-114 Identities = 327/386 (85%), Gaps = 8/386 (2%) Strand=Plus/Minus Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 |||||||||||||||||||||||||||||| |||| |||||| ||| | |||||||| Sbjct 2938 GGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCGTAGTAGGCCA 2879 Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAG 244 |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 2878 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCACAAAG 2819 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCGTTGGT 300 ||| |||||| ||| |||||| |||||||| | | | | | | || |||| | Sbjct 2818 GCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGCGACGGGCAGAGCCCGCGTCGAC 2759 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||||||||| Sbjct 2758 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTA 2699 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||| |||||||||| |||| || ||| |||||| |||| ||||||||||||||| Sbjct 2698 GAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATAACTGATTTAATG 2640 Query 420 AGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||||| || | ||| | | ||||||| ||||||||||||||||||| Sbjct 2639 AGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTT 2580 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 2579 TGAGACAAGCATATGACTACTGGCAG 2554 Score = 253 bits (280), Expect = 6e-65 Identities = 157/167 (94%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||| Sbjct 6404 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 6346 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6345 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6286 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 ||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 6285 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGT 6239 >seq4503 Length=10536 Score = 295 bits (326), Expect = 2e-77 Identities = 235/280 (84%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || ||| |||| || |||| ||||| | |||||||| Sbjct 617 GTACTCATTCCAATTACGGGGCCTCAATAGAGTCCCGTATTGTTATTTTTCGTCACTACA 676 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 677 TCCCCGTACTGGGATTGTGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 736 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 737 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACAACCATGGT 796 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| ||||| |||| || ||||| |||| Sbjct 797 AGGCGCATAACCTACCATCGACAGTTGATAAGGCAGTTGCTTGAGGGATACATCGTCGGC 856 Query 240 TCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCA 278 ||| ||||||| ||||| | | ||||||| || ||| || Sbjct 857 TCAGAGGCCATACGATTTGCTCAGTTATTCAGAGTCATCA 896 Score = 196 bits (216), Expect = 1e-47 Identities = 140/160 (88%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404 ||||||||||||||||||||||||| |||||||||||| || | | |||| | ||| Sbjct 1050 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAAAAAAGAA-TATCCGAGGAACC 1108 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||||||||||||| |||||||| |||| | | | |||||||||||| Sbjct 1109 GTAACTGATTTAATGAGCCATTCGCGGTTTCACTTTATAAACAGTATGTACTTAGACATG 1168 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||| Sbjct 1169 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1208 >seq4226 Length=17910 Score = 217 bits (240), Expect = 4e-54 Identities = 253/333 (76%), Gaps = 19/333 (6%) Strand=Plus/Plus Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCA 248 ||||||||||| |||||||| |||||| ||||||| || | |||||||| | |||||| Sbjct 6776 CCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGCACGAAGGCCG 6835 Query 249 TGCGATTCGTT--AAGTTATTATGAATCACCAAGG-AGCC-----CCGAAGGG--CGTTG 298 |||||| | |||||||| || ||||||| | || | ||||| || | Sbjct 6836 TGCGATCAGCCCAAAGTTATTCAGAGTCACCAAAGTAGACGATGGCCGAAACCACCGATT 6895 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTTTT--TAGCATGTATT 352 | |||| |||||||||| | |||||||| |||||| | | | ||||||||| Sbjct 6896 GGTTTTGATCTAATAAAAGCGTCCCTTCCGTCTCCGGTCGGGACTCTGTTGGCATGTATT 6955 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTG 411 ||||| || ||| || | |||||||||||| | | |||| ||| | | ||| ||||||| Sbjct 6956 AGCTCCAGTATTTCCGCAGTTATCCATGTAACTGAAGTACGATCTATTGAACCATAACTG 7015 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||| | ||| ||||||| || | | |||| |||||||||||||||||| Sbjct 7016 ATATAATGAGCCTTCCGCGGTTTCACCTTAATG-TGGCTTGCACTTAGACATGCATGGCT 7074 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||| Sbjct 7075 TAATCTTTGAGACAAGCATATGATAACTGGCAG 7107 >seq2 Length=43913520 Score = 179 bits (198), Expect = 1e-42 Identities = 228/308 (74%), Gaps = 17/308 (6%) Strand=Plus/Minus Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG---GCC 184 ||||||| || ||||||||||||||| ||||||||| | ||||| |||| ||| Sbjct 3328018 CTCCCTCGCCAAAATCGAACCCTAATTATCCGTTACCCAT---CACCATCGTAGTAAGCC 3327962 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA- 243 ||||| |||||||| ||||||||| || ||||||||| ||||| |||||||| || Sbjct 3327961 ACTATGCTACCATCAAAAGTTGATGGGACAGAAATTTAAATGATGTGTCGCCGGCAAAAG 3327902 Query 244 GGCCATGCGATTCGTTAAGT----TATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295 || | |||||| ||| ||| ||| |||||||| | | | | | | | || | Sbjct 3327901 GGTCGTGCGATCCGTCGAGTTATATATCATGAATCATCGAAGCGACAGGCATAGCCTGTG 3327842 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 | | |||||| || ||||| || ||||||| ||||||||||||| | ||| |||||| Sbjct 3327841 TCGACCTTTTATATACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACATATTAG 3327782 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||| |||||||| || ||||||| ||| || || | ||| |||| |||||||||| Sbjct 3327781 CTCAAGAATTACTACAGTTATCCGCATAGCAA-ATAGAAAAAAACAAACTATAACTGATT 3327723 Query 415 TAATGAGC 422 || | ||| Sbjct 3327722 TAGTAAGC 3327715 >seq6 Length=36610139 Score = 152 bits (168), Expect = 2e-34 Identities = 239/331 (72%), Gaps = 17/331 (5%) Strand=Plus/Minus Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||||||||||| |||||| |||||||| ||||| ||| | |||| | |||| | Sbjct 2107804 TAGGCCACTATCATACCATTAAAAGTTGAATGGGCATAAAAT-GAATAATGTGTCGCTGT 2107746 Query 239 CTCAAGG--CCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCGA---AG 291 || || || ||||||| |||| | |||| ||| | || || |||| || Sbjct 2107745 TAAAAAAAACCGTGTAATTCGTTGAGTTTTCATGA-TCATC---GAACCGACCGACAGAG 2107690 Query 292 GGCG--TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTT-TAGCATG 348 | | | | ||||||||||||||| || |||| | || ||||| | |||| Sbjct 2107689 TCCCAATCGATCTTTTATCTAATAAATGTACTCCTTTCAAAAATTTAGTTTTGTTACATG 2107630 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||| |||||||| || |||||| |||| || || ||||||| ||| |||| Sbjct 2107629 TATTAGCTCCAGAATTACAACAGTTATCTGAGTAGCAAA-TAATATCAAACAAATAATAA 2107571 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCAT 467 ||||||||||||| ||| | ||||| || || | ||| | | ||||||| |||| ||| Sbjct 2107570 TTGATTTAATGAGCTATTTGTAGTTTTACGGTTTGAATTACATCATACTTACACATCCAT 2107511 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTAC 498 | ||| |||||||||||| | |||||||||| Sbjct 2107510 GACTTTATCTTTGAGACATGAATATGACTAC 2107480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510327108096