Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq4825 693 0.0 seq6 443 2e-119 seq8 372 3e-98 seq36 167 3e-36 seq4 159 4e-34 seq1731 132 5e-26 seq4826 127 2e-24 seq1 118 1e-21 seq3 105 7e-18 >seq4825 Length=155848 Score = 693 bits (768), Expect = 0.0 Identities = 737/967 (76%), Gaps = 4/967 (0%) Strand=Plus/Minus Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658 || ||||||||| | || ||||| ||||| |||||||||| ||| | ||| | ||||| Sbjct 1250 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1191 Query 160659 GTCTGC-TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGA 160717 |||| ||||||| || ||| |||||||||| || || || || || ||||| ||||| Sbjct 1190 -TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1132 Query 160718 ACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTC 160777 ||| ||| |||| || || | ||||| ||||| || || || ||||| || |||| | Sbjct 1131 ACCTGTTTCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGAC 1072 Query 160778 TTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATG 160837 ||| || || ||| | ||||| || || || |||||||| || ||| |||||||||| Sbjct 1071 TTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATG 1012 Query 160838 GCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTG 160897 | | ||||| ||||||||||| || | |||| | ||||| | | || | || Sbjct 1011 GTTATACAACGGTGGTCCTTATGAATTAATCGTTCTACACTTTTTACTTGGTGTAGCTTG 952 Query 160898 CTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-G 160956 ||||||||||| |||||||| ||| | ||| || || ||||| || ||||| ||| | Sbjct 951 TTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGCTG 893 Query 160957 TTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTC 161016 |||||||||| || |||||||| ||||| | ||| || ||| | |||| || |||||| Sbjct 892 TTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTC 833 Query 161017 AAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTG 161076 |||| || |||||||||||||| || || ||||||||||| |||||||||||| ||| Sbjct 832 AAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTG 773 Query 161077 TCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTG 161136 | |||||||| || ||||||||||| |||||||| || |||||||| || || ||||||| Sbjct 772 TATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTG 713 Query 161137 TCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTC 161196 | ||||| ||||| || || || ||||||||||| |||| || ||| || | Sbjct 712 TATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCA 653 Query 161197 GTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGA 161256 | |||||||| || || || || || | ||||||| ||| || ||||||||||| | Sbjct 652 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAA 593 Query 161257 CCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCT 161316 | || || ||||| || ||||||||||| || || || | ||||||||||| ||| | Sbjct 592 CTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTT 533 Query 161317 TCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGT 161376 |||||||||| ||||| || ||||||||||| || || |||||||| || |||||||||| Sbjct 532 TCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 473 Query 161377 TCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGT 161436 | ||||| | ||| || ||| ||||| |||||||| || || ||||| |||||||| | Sbjct 472 TTACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAAT 413 Query 161437 CCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTA 161496 | | | ||| |||| ||| || | || || |||||||| | | || || |||| Sbjct 412 CTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTA 353 Query 161497 ACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTG 161556 |||||||||||||||| |||||||| ||||||||||| ||||||||||| || | |||| Sbjct 352 ACCTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTG 293 Query 161557 CTGCTGA 161563 ||| ||| Sbjct 292 CTGTTGA 286 Score = 536 bits (594), Expect = 1e-147 Identities = 716/991 (72%), Gaps = 8/991 (1%) Strand=Plus/Plus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || || || ||||| || ||||| || || | || ||||| ||| ||| | || Sbjct 33169 GACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 33228 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || |||||| | || |||||||| ||||| || ||||| ||||| || | || Sbjct 33229 GTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCC 33288 Query 164037 TCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 |||| | ||| ||| ||| |||||| | || || || || || || |||||| | Sbjct 33289 ---AGTTCCTATTTGGAAGGCTGC-AATTTCTTAACTGCCGCAGTTTCTACTCCTGCTAA 33344 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | |||||| | | |||| ||||||||||| | || ||||| || | | | Sbjct 33345 TAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCG 33404 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212 ||||| ||| | || || || ||| ||||||| || |||| || |||||| || || Sbjct 33405 TTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCATGGTGCTTTCGGACTAAT 33464 Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272 || |||||| | || || || ||| |||| || ||| | || || || ||||| Sbjct 33465 AGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 33524 Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332 || ||||| |||||||| |||||||| ||||| || ||||| || || || || || Sbjct 33525 AATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGG 33584 Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392 |||||| ||||||||||||| || ||||| || || || || || ||||| || | Sbjct 33585 ACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCT 33644 Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452 || | ||||| || ||||| |||||| | ||||| || ||||||||||| |||||||| Sbjct 33645 CTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCAGG 33704 Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512 | | || | |||| | || || ||||||||||||||||| ||||| |||||||| || Sbjct 33705 GGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 33764 Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572 |||||||||||| ||||||| ||| || || | || ||||||| ||||| || Sbjct 33765 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAAC 33824 Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632 ||| || |||||||| || |||||||| ||||| || || ||||| ||||||| ||| Sbjct 33825 TTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 33884 Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692 ||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 33885 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGC 33944 Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752 | |||| | | ||||| || || || || || || ||||| || || |||||||| || Sbjct 33945 TCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATGACTTCGTTTCTCAGGAAAT 34004 Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812 | | || ||||| ||||||||||||||||| ||||| || || || || ||| | || || Sbjct 34005 TCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGA 34064 Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872 ||| | ||||| |||||||| | ||| ||||| || ||| || |||| || || Sbjct 34065 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 34124 Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 ||| ||||| || | || ||||| || ||| Sbjct 34125 GGAGGTTCTACCCCGTGGAAACGCTCTTTAA 34155 >seq6 Length=36610139 Score = 443 bits (490), Expect = 2e-119 Identities = 463/604 (77%), Gaps = 3/604 (0%) Strand=Plus/Plus Query 160911 GAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-GTTGCATATTCTGC 160969 ||| |||| ||| | ||| || || ||||| || ||||| ||| ||||||||||| || Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGC 34152548 Query 160970 ACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTC 161029 |||||||| ||||| | ||| || ||| | |||| || |||||||||| || || Sbjct 34152549 TCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTC 34152608 Query 161030 TGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGTCTTCCAGGCAGA 161089 |||||||||||| || || ||||||||||| |||||||||||| |||| |||||||| || Sbjct 34152609 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGA 34152668 Query 161090 ACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTC 161149 ||||||||||| |||||||| || |||||||| || || |||||||| ||||| ||||| Sbjct 34152669 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTC 34152728 Query 161150 TCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGA 161209 || || || ||||||||||| |||| || ||| || | | |||||||| || Sbjct 34152729 CCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGA 34152788 Query 161210 GAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT 161269 || || || || | ||||||| ||| || ||||||||||| || || || ||||| Sbjct 34152789 AAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGT 34152848 Query 161270 CGCTGCTCATGGTTACTTCGGT-CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCC 161328 || ||||||||||| || ||| || | ||||||||||| ||| ||||||||||| | Sbjct 34152849 AGCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTC 34152908 Query 161329 GTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTG 161388 |||| || ||||||||||| || || |||||||| || ||||||||||| ||||| | | Sbjct 34152909 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG 34152968 Query 161389 GTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGTCCATCATGGATG 161448 || || ||| ||||| |||||||| || || ||||| |||||||| || | | ||| Sbjct 34152969 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 34153028 Query 161449 GTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGG 161508 |||| ||| || | || || |||||||| | | || || |||||||||||||||| Sbjct 34153029 GTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGG 34153088 Query 161509 AAGT 161512 | || Sbjct 34153089 AGGT 34153092 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 161490 CGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGAT 161549 ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| || Sbjct 7295900 CGTGC-AACCTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGAC 7295958 Query 161550 CTCGCTGCTGCTGA 161563 | ||||||| ||| Sbjct 7295959 TTAGCTGCTGTTGA 7295972 >seq8 Length=31745509 Score = 372 bits (412), Expect = 3e-98 Identities = 365/468 (78%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 160896 TGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC 160955 || ||||||||||| |||||||| ||| | ||| || || ||||| || ||||| ||| Sbjct 5168710 TGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGC 5168768 Query 160956 -GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGG 161014 ||||||||||| || |||||||| ||||| | ||| || ||| | |||| || |||| Sbjct 5168769 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGG 5168828 Query 161015 TCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCT 161074 |||||| || |||||||||||||| || || ||||||||||| |||||||||||| | Sbjct 5168829 TCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGAT 5168888 Query 161075 TGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGG 161134 ||| |||||||| || ||||||||||| |||||||| || |||||||| || || ||||| Sbjct 5168889 TGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGG 5168948 Query 161135 TGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGT 161194 ||| ||||| ||||| || || || ||||||||||| |||| || ||| || | Sbjct 5168949 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGAT 5169008 Query 161195 TCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGA 161254 | |||||||| || || || || || | ||||||| ||| || ||||||||||| Sbjct 5169009 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGA 5169068 Query 161255 GACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTC 161314 || || || ||||| || ||||||||||| || || || | ||||||||||| ||| Sbjct 5169069 AACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 5169128 Query 161315 CTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGT 161362 ||||||||||| ||||| || ||||||||||| || || |||||||| Sbjct 5169129 TTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq36 Length=917149 Score = 167 bits (184), Expect = 3e-36 Identities = 195/261 (75%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658 || ||||||||| | || ||||| ||||| |||||||||| ||| | ||| | ||||| Sbjct 329970 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 329911 Query 160659 GTCTGC-TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGA 160717 |||| ||||||| || ||| |||| ||| || || || || || ||||| ||||| Sbjct 329910 -TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGA 329852 Query 160718 ACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTC 160777 ||| ||| | || || || | ||||| ||||| || || || ||||| || |||| | Sbjct 329851 ACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGAC 329792 Query 160778 TTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATG 160837 ||| || || ||| | ||||| || || || |||||||| || ||| |||||||||| Sbjct 329791 TTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATG 329732 Query 160838 GCTCTACAATGGTGGTCCTTA 160858 | | ||||| ||||||||||| Sbjct 329731 GTTATACAACGGTGGTCCTTA 329711 >seq4 Length=35924511 Score = 159 bits (176), Expect = 4e-34 Identities = 184/248 (74%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 161316 TTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 161375 ||||||||||| ||||| || ||||||||||| || || |||||||| | |||||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 161376 TTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAG 161435 || ||||| | ||| || ||| ||| | |||||||| || | ||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 161436 TCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCT 161495 || | | ||| |||| | | || | || || || ||||| | | || || ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 161496 AACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCT 161555 || ||||||| ||||| |||| ||| | ||||||||| |||||| |||| || | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 161556 GCTGCTGA 161563 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq1731 Length=31681 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 164706 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAG 164765 ||||| || || || || || || ||||| || || |||||||| ||| | || ||||| Sbjct 4295 GGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAA 4236 Query 164766 GATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCC 164825 ||||||||||||||||| ||||| || || || || ||| | || ||||| | ||||| Sbjct 4235 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 4176 Query 164826 TGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCG 164885 |||||||| | ||| ||||| || ||| | || |||| || ||||| ||||| || Sbjct 4175 TGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTACCC 4116 Query 164886 AGAGGTAACGCACTCTAA 164903 | || ||||| || ||| Sbjct 4115 CGTGGAAACGCTCTTTAA 4098 >seq4826 Length=244980 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 164706 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAG 164765 ||||| || || || || || || ||||| || || |||||||| ||| | || ||||| Sbjct 497 GGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAA 438 Query 164766 GATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCC 164825 ||||||||||||||||| ||||| || || || || ||| | || ||||| | ||||| Sbjct 437 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 378 Query 164826 TGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCG 164885 |||||||| | ||| ||||| || ||| || |||| || ||||| ||||| || Sbjct 377 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 318 Query 164886 AGAGGTAACGCACTCTAA 164903 | || ||||| || ||| Sbjct 317 CGTGGAAACGCTCTTTAA 300 >seq1 Length=51465339 Score = 118 bits (130), Expect = 1e-21 Identities = 226/336 (67%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTC 161288 ||||||| ||| || ||||||||||| | | || ||||| | |||||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 161289 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTC 161348 ||||| | || ||||||| ||| ||||||||||| | ||| || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 161349 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACT-GCACTTGGTGTCTCCACCATGGCATT 161407 ||| |||||||||| ||| || ||| || ||| ||||| || Sbjct 27733275 -----------AGTT----GTATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 161408 CAACCTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAA 161467 ||| || || || |||| |||||||| || | | ||| |||| | | || | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 161468 CACCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAA 161527 || |||||||| | || |||||||| |||| ||||| |||| Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTG--------GTAAT--------GTAA 27733423 Query 161528 TGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 161563 |||||| ||||||||||| || | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 >seq3 Length=50312079 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 164706 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAG 164765 ||||| || || || | || || ||||| || || |||||| | ||| | || ||||| Sbjct 34945762 GGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAGAA 34945821 Query 164766 GATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCC 164825 ||||||||||||||||| ||||| || || || || ||| | || ||||| | ||||| Sbjct 34945822 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 34945881 Query 164826 TGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCG 164885 |||||||| | ||| ||| | || ||| || |||| || ||||| ||| || Sbjct 34945882 TGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTACCC 34945941 Query 164886 AGAGGTAACGCACTCTAA 164903 | || ||||| || ||| Sbjct 34945942 CGTGGAAACGCTCTTTAA 34945959 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 164706 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAG 164765 ||||| || || || || || || ||||| || || |||| || ||| | || ||||| Sbjct 24072546 GGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAGAA 24072487 Query 164766 GATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCC 164825 |||||||||||||||| || | || || || || ||| | || ||||| | ||||| Sbjct 24072486 GATCCTGAATTTGAGATTTTTGACAC-AAAAATATTCTCTTAAACGAAGGTATTCGTGCT 24072428 Query 164826 TGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCG 164885 |||||||| | ||| ||||| || ||| || |||| || |||| ||||| || Sbjct 24072427 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTACCC 24072368 Query 164886 AGAGGTAACGCACTCTAA 164903 | || ||||| || ||| Sbjct 24072367 CGTGGAAACGCTCTTTAA 24072350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559294258538400