Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq38433 95.1 1e-17 >seq38433 Length=1672 Score = 95.1 bits (104), Expect = 1e-17 Identities = 137/193 (71%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||| ||||||| ||||||| |||||||| ||||| |||| || | | Sbjct 62 TTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTGCTTCAGCACCGTAGT 121 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 | |||||||||| | | ||||| | |||||||| ||| | ||||||||| Sbjct 122 GC---CTCGTCATCACGCCTCAGCCTTGATTTTCCGGATTTGCCTGGAAAACCAGCCTAC 178 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 ||||||| |||||||| |||| || | |||||||||||||||| || ||||| Sbjct 179 ACGCTTAAACCGGGACAACCGTCGCCCGGCCAACATAGCCTTCTCCGTCCCCCCTTCGCA 238 Query 181 TTAACCAGAAGTA 193 |||| ||||| Sbjct 239 GTAACACCAAGTA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518173568064