Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq32758 208 2e-51 seq1880 197 4e-48 seq20009 185 2e-44 seq21536 163 7e-38 seq4222 141 2e-31 seq8972 111 4e-22 seq4209 111 4e-22 seq16158 102 2e-19 seq9341 89.7 1e-15 seq21465 87.8 5e-15 >seq32758 Length=53022 Score = 208 bits (230), Expect = 2e-51 Identities = 247/335 (74%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||| ||||||||||| || ||| ||| Sbjct 539 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGTAGCCGCGGTAAGACAGAGGATGC 480 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 479 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 420 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| ||| | | ||| | || |||| | || Sbjct 419 CAAATCCCAGGGCTCAACCCTGGACATGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 360 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||| ||||| || | | ||||||||| || Sbjct 359 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGTGTAGAGATCGGAAAGAACACCAACGG 300 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 299 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 240 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||| ||||||| ||| |||||||| Sbjct 239 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGAT 205 >seq1880 Length=405587 Score = 197 bits (218), Expect = 4e-48 Identities = 247/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 220625 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 220566 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAA- 126 || ||||||| ||||||||||||| | || ||||||| | | ||| ||||| Sbjct 220565 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTG-----AATCGGGT-TGAAAG 220512 Query 127 TCCCCG--GGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 | | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 220511 TTAAAGTTGCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 220452 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| || |||| | | |||||| |||| || Sbjct 220451 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGC 220392 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| |||||| Sbjct 220391 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGG 220332 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 220331 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 220298 >seq20009 Length=347207 Score = 185 bits (204), Expect = 2e-44 Identities = 237/327 (72%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||| |||||||| || ||| ||| Sbjct 51919 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGTCGCGGTAAGACAGAGGATGC 51860 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 51859 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 51800 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 51799 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 51740 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| | | |||||||| ||||| || | | ||||||||| || Sbjct 51739 GGCAGAGGGAATTTCCGGTGGACCGGTGAAATGTGTAGAGATCGGAAAGAACACCAACGG 51680 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| ||| |||| || | |||||||| ||||||| || | Sbjct 51679 CGAAAGCACTCTGCTGGGCCGACAATGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 51620 Query 303 GATTAGATACCCTGGTAGTCCACGCCC 329 |||||||||||| ||||||| |||| Sbjct 51619 GATTAGATACCCCAGTAGTCCTAGCCC 51593 >seq21536 Length=432048 Score = 163 bits (180), Expect = 7e-38 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 15784 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 15843 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 15844 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 15903 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 15904 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 15963 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||| ||||| || | | ||||||||| || Sbjct 15964 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGTGTAGAGATCGGAAAGAACACCAACGG 16023 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGC 287 |||| ||| | ||||| |||||||| || | |||||||| Sbjct 16024 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGC 16068 >seq4222 Length=193645 Score = 141 bits (156), Expect = 2e-31 Identities = 180/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||| ||||||||||| || ||| ||| Sbjct 182705 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGTAGCCGCGGTAAGACAGAGGATGC 182646 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||||||||||||| | || || | | |||| | | || Sbjct 182645 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGGCTGTAGTTGGCTTTTTAAGTCCGCCGT 182586 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| ||| | | ||| | || |||| | || Sbjct 182585 CAAATCCCAGGGCTCAACCCTGGACATGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 182526 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||| ||||| || | | ||||||||| || Sbjct 182525 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGTGTAGAGATCGGAAAGAACACCAACGG 182466 Query 243 CGAAGGCA 250 |||| ||| Sbjct 182465 CGAAAGCA 182458 >seq8972 Length=784345 Score = 111 bits (122), Expect = 4e-22 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| ||||||||||||||| ||| || ||| || Sbjct 326769 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGATAAGACAGAGGATGT 326828 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 326829 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAATCCGCCGT 326888 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 326889 CAAATCCCAGGGCTCAACC 326907 >seq4209 Length=462070 Score = 111 bits (122), Expect = 4e-22 Identities = 227/335 (68%), Gaps = 3/335 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||| ||||| |||||||||||| ||||| || || | || Sbjct 287539 TATCTGGGGAATAAGCATCGGATAACTCTGTGCCAGCAGCCATGGTAAGAC--AGAGGGC 287596 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||||||||| || | | ||| || | | |||| | | | Sbjct 287597 AAGCGTTATCCGGAATGATTGGGCGTAAGGCTTCTGTAGGTGGCTTTTTAAGTCTGCCAT 287656 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||| ||||| |||| ||| | | | ||| | ||||||| | || Sbjct 287657 CAAATCCTAGGGCTCAACCATGGATAGACGGTGGAAACTACCAAGCTAGAGTACGATAGG 287716 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | || ||| ||||||| |||| || | | ||||||||| | Sbjct 287717 GGCAGAGGGAATTTCCGATGGAGCGATGAAATGTATAGAGATCGGAAAGAACACCAACGC 287776 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| | | | ||||| | |||||| | || | |||||| | |||||| || Sbjct 287777 CGAATGAAATCTGCTGGGCTGACACTGGCACTGAGAGACGAAATCTAGGGGAGTGAATGA 287836 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 || |||| ||| ||||||| ||| |||| ||| Sbjct 287837 GA-AAGATGCCCAAGTAGTCCTAGCCGTAAATGAT 287870 >seq16158 Length=488603 Score = 102 bits (112), Expect = 2e-19 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| | |||||| ||||||| || ||| ||| Sbjct 379732 TATCTGGGGAATAAGCATCGGCTAACTCTG----AGCAGCTGCGGTAAGACTGAGGATGC 379787 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||| ||||| | ||| || | | |||| | || Sbjct 379788 AAGCGTTATCCGGAATGATTGGGCGTATAGCGTCTGTAGGTGGCTTTCTAAGTACGTCGT 379847 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 379848 CAAATCCTAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 379907 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||| | | ||| ||| |||||||| ||||| || | | ||||||||| || Sbjct 379908 GGCAGAGGGAACTTCCGGTGGAGCGGTGAAATGTGTAGAGATCGGAAAGAACACCAACGG 379967 Query 243 CGAAGGC 249 ||| || Sbjct 379968 AGAAAGC 379974 >seq9341 Length=129751 Score = 89.7 bits (98), Expect = 1e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| ||| |||||| || ||||||||| ||||||||||||||||||| | | | || Sbjct 121443 ATATCTGGGGAATAAACATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGATAGATGATG 121502 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 ||||||||| |||||| | |||| ||||||||| Sbjct 121503 CAAGCGTTATCCGGAATGATTGGGTGTAAAGCGT 121536 >seq21465 Length=42109 Score = 87.8 bits (96), Expect = 5e-15 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 ||| |||| | ||||| || |||||| | ||||||| |||||||| ||||||| Sbjct 32631 AAGTCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGA 32572 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||| ||| |||||||| Sbjct 32571 TTAGATACCCTGGTAGTCCATGCCGTAAACGAT 32539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1284419006208