Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5765 338 1e-90 seq13556 280 3e-73 seq17465 264 2e-68 seq28652 174 3e-41 seq186726 141 2e-31 seq450 109 1e-21 seq238947 100 6e-19 seq13059 100 6e-19 seq4229 98.7 2e-18 seq33914 96.9 7e-18 seq10699 93.3 9e-17 seq21265 80.6 6e-13 seq7458 80.6 6e-13 >seq5765 Length=308280 Score = 338 bits (374), Expect = 1e-90 Identities = 289/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 255347 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 255288 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255287 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 255228 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 255227 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 255168 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 255167 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 255108 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 255107 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 255048 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 255047 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 254996 >seq13556 Length=63205 Score = 280 bits (310), Expect = 3e-73 Identities = 277/353 (78%), Gaps = 9/353 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||| ||| || | ||||||||||||| |||||| Sbjct 34725 GCATCTTCACAGACATGTCTATTTCACTGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 34666 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 34665 ACGCCTTTCGTGCGGGTCGGAACTTACCCCACAAGGAATTTCGCTACCTTAGGACCGTTA 34606 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| |||||||||| || | ||| | | | || | || Sbjct 34605 TAGTTACGGCCGCCGTTCACTGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 34546 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| |||||| ||| |||||||||||||| || |||||| ||||| |||||| Sbjct 34545 ACTTCCTTGTCCTTCCGCCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 34486 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT---GCGGCCTGTCA 299 || || | ||||||||||||||||||||||| | |||| || || | ||| | Sbjct 34485 GCGGAGATCTGTGTTTTTGGTAAACAGTCGCCCGAGCCTGGTCACTATGACCCCCTTTGT 34426 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||| |||||||||| ||| || |||| |||||||||||||||||| Sbjct 34425 GAG-GAGGGGCCCCTTCTCCTGAAG-TATGGGGATATTTTGCCGAGTTCCTTA 34375 >seq17465 Length=2784 Score = 264 bits (292), Expect = 2e-68 Identities = 284/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 1300 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 1241 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 1240 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 1181 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| |||| || |||| || ||||| Sbjct 1180 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGC--------AACTAAC 1129 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 1128 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 1069 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 1068 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 1009 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 1008 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 949 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 948 CTTCGACATGGTTCTC 933 >seq28652 Length=283007 Score = 174 bits (192), Expect = 3e-41 Identities = 141/169 (83%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| || | Sbjct 99168 CCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGG 99109 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 | ||||||||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 99108 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAG- 99050 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 99049 GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 99001 >seq186726 Length=605 Score = 141 bits (156), Expect = 2e-31 Identities = 120/146 (82%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 210 GGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAG 269 ||||||||| ||||||||| ||||| |||||| || || |||||||||||| |||||||| Sbjct 107 GGCGTCAGCCCCTATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTTGTAAACAG 166 Query 270 TCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTT 326 ||| |||||| || ||||| ||| | || |||||||||||||||| ||||| Sbjct 167 TCGTCCGGGCCTGGTCACTGCGACCCCCTTTGTGAG-GAGGCACCCCTTCTCCCGAAGTT 225 Query 327 ACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||| |||||||||||||||||| Sbjct 226 ACGGGGCTATTTTGCCGAGTTCCTTA 251 >seq450 Length=107165 Score = 109 bits (120), Expect = 1e-21 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 46 TGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAAT 105 || |||| ||| || |||| |||||||||||| | | | ||||||||||||||||||||| Sbjct 90545 TGCGACAATGCTCAGATCGCTACGCCTTTCGTACAGATAGGAACTTACCCGACAAGGAAT 90486 Query 106 TTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTT 143 ||| |||||||| ||||||||||||||| || | ||| Sbjct 90485 TTCAATACCTTAGAACCGTTATAGTTACGACCACTGTT 90448 >seq238947 Length=472 Score = 100 bits (110), Expect = 6e-19 Identities = 86/105 (82%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||| ||| |||||||||||| |||||| || |||| | ||||||| | ||||| || Sbjct 204 GAGACCGTGTCCAAATCGTTACACCTTTCATGTAGGTCAGGACTTACCTAATAAGGACTT 145 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA-CTGGG 150 | ||||| |||||| ||||||||||| ||||| |||| | ||||| Sbjct 144 TTGCTACATTAGGATCGTTATAGTTATGGCCGTCGTTCATCTGGG 100 >seq13059 Length=131169 Score = 100 bits (110), Expect = 6e-19 Identities = 86/105 (82%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||| ||| |||||||||||| |||||| || |||| | ||||||| | ||||| || Sbjct 106890 GAGACCGTGTCCAAATCGTTACACCTTTCATGTAGGTCAGGACTTACCTAATAAGGACTT 106949 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA-CTGGG 150 | ||||| |||||| ||||||||||| ||||| |||| | ||||| Sbjct 106950 TTGCTACATTAGGATCGTTATAGTTATGGCCGTCGTTCATCTGGG 106994 >seq4229 Length=230943 Score = 98.7 bits (108), Expect = 2e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251 |||||||||||||||||||| ||||| ||||||||||| || | |||||||||| || Sbjct 51720 ACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCC 51661 Query 252 TGTGTTTTTGGTAAACAGTCGCTT 275 ||| ||||| ||||||||||||| Sbjct 51660 TGTATTTTTAATAAACAGTCGCTT 51637 >seq33914 Length=16759 Score = 96.9 bits (106), Expect = 7e-18 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 212 CGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 ||||||| ||||||||| ||||| |||||| || || ||||||||||||||||||||||| Sbjct 10072 CGTCAGCCCCTATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTC 10131 Query 272 GCTTGGGCCTATTCTCTGCGGCC 294 || |||||| || ||||| || Sbjct 10132 GCCCGGGCCTGGTCACTGCGACC 10154 >seq10699 Length=209159 Score = 93.3 bits (102), Expect = 9e-17 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||| ||||||| |||| || ||| |||||| ||||||||| ||||| || ||| ||||| Sbjct 140205 CTTGACCTTCCGGCACTGGACAGATGTCAGCCCCTATACATGGTCTTACGGCTTTGCAGA 140264 Query 248 AACCTGTGTTTTTGGTAAACAGTC 271 |||||||||||| |||||||||| Sbjct 140265 GACCTGTGTTTTTTGTAAACAGTC 140288 >seq21265 Length=811174 Score = 80.6 bits (88), Expect = 6e-13 Identities = 81/104 (78%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 29 TTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAA 88 || |||||| || | |||||| || ||| ||||||||||||||| | | || |||| Sbjct 356315 TTTACCGAGCCTCTCTACGAGACA-TGTCCAGATCGTTACGCCTTTCATACATGTTGGAA 356257 Query 89 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 132 |||| | ||||| |||||| |||||||||| | |||||| ||| Sbjct 356256 CTTATCTGACAAAGAATTTTGCTACCTTAGAATTGTTATAATTA 356213 >seq7458 Length=425881 Score = 80.6 bits (88), Expect = 6e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||| || | ||||||| ||||||||||| Sbjct 182260 GCATCTTCACAGACATGTCTATTTCACCGAACCTCTCTCCAAGACAGTACCCAAATCGTT 182319 Query 67 ACGCCTTTCGTGCGGGTCGGAA 88 |||||||||||||||||||||| Sbjct 182320 ACGCCTTTCGTGCGGGTCGGAA 182341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1058131786752