Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq5765 264 4e-68 seq12612 134 5e-29 seq3301 131 6e-28 seq16812 129 2e-27 seq2084 113 2e-22 seq18752 82.4 3e-13 seq133997 78.8 3e-12 seq338599 75.2 4e-11 seq15657 75.2 4e-11 seq10068 75.2 4e-11 >seq5765 Length=308280 Score = 264 bits (292), Expect = 4e-68 Identities = 345/470 (73%), Gaps = 28/470 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 254214 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 254155 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 254154 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 254095 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 254094 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 254035 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 254034 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 253982 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 253981 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 253927 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 253926 CCCT----GGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 253876 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 253875 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 253816 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 253815 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 253766 >seq12612 Length=976269 Score = 134 bits (148), Expect = 5e-29 Identities = 151/201 (75%), Gaps = 12/201 (6%) Strand=Plus/Minus Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTC 450 |||| |||||||||||||| |||||||| |||| ||| ||| | ||| Sbjct 752174 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAAAGC---CCT----GGCTC-----CTC 752127 Query 451 CGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTC 510 | || | ||| || | ||||||| || ||||||||||||||| ||||| |||||| Sbjct 752126 CCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTC 752067 Query 511 ACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGG 570 ||| ||||||||||||||| | |||||||||||||| ||||||||||| ||| || Sbjct 752066 ACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTATCCTTGCAAGG 752007 Query 571 TGGTCCCGCCAGATTCACACG 591 |||||| | |||||||||| Sbjct 752006 TGGTCCTTGCTGATTCACACG 751986 >seq3301 Length=40528 Score = 131 bits (144), Expect = 6e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || ||||||||||||||| ||||| ||||||||| ||||||||||||||| Sbjct 28828 GGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACT 28887 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 | |||||||||||||| |||||||||||| ||| |||||||| | |||||||| Sbjct 28888 ACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACA 28947 Query 590 CGAAATTTCA 599 || ||| || Sbjct 28948 CGGGATTCCA 28957 >seq16812 Length=815016 Score = 129 bits (142), Expect = 2e-27 Identities = 263/383 (69%), Gaps = 32/383 (8%) Strand=Plus/Minus Query 225 TCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGA 284 ||||| | ||| | ||||| ||||||| || | |||| |||||| || | ||| || Sbjct 568381 TCAACATCAGTCGATTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCAGGTCATAGA 568322 Query 285 TAGATCACTTCGCTTCGGGTCTTGATC--GTGCCACTCATACGCCCTATTCGGACTCGCT 342 |||||||| | |||||||| | ||| || | ||||||| |||||||| Sbjct 568321 TAGATCACCA-GATTCGGGTCCACAAGCAGTGACAATT----GCCCTATGAAGACTCGCT 568267 Query 343 TTCGCTACGGCTACCCCACACGGGTT-----AACCTCGCGACACAACGCAA-ACTCGCAG 396 ||||| |||||| | | ||||| |||| || ||| || | | |||| | Sbjct 568266 TTCGCCACGGCTCCG----ATGGGTTCCCTTAACCAAGC--CACGACCTATGAGTCGCTG 568213 Query 397 GCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGG 456 ||||||||||||| ||| | || |||| | ||| | || |||| || | Sbjct 568212 GCTCATTCTTCAACAGGGATGCGGTCA---GAGCCCTGGA-------TC--CTCCCACTG 568165 Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTT 516 ||| || | ||||||| || || |||||||||| | ||||| ||||||||| || Sbjct 568164 CTTGGGAGCTTACGGTTTCATGTTCTGTTTCACTCCCTGATGGGGGTTCTTTTCACCCTT 568105 Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 ||||||||||||| | | ||||||||||| |||||||||||| ||| |||||||| Sbjct 568104 CCCTCACGGTACTACT-TGATATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 568046 Query 577 CGCCAGATTCACACGAAATTTCA 599 | | |||||||| ||| || Sbjct 568045 TTGCTGTTTCACACGGGATTCCA 568023 >seq2084 Length=474923 Score = 113 bits (124), Expect = 2e-22 Identities = 127/169 (75%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| | ||||||||||||||||||||| | | ||| || ||| || ||| Sbjct 150918 GCTGCGCCTCGACGCATTTCGGGGAGAACCAGCTGGCTCTGGGTTCGAGTGGTATT-CAC 150860 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| |||||| || ||| || | |||||||| | ||| ||||| | ||| ||| || Sbjct 150859 CCCTAACCACAGCTCCTCCGCTGATTTTTCAACGTTAGTTGGTTCTGACCTTCACTTAGT 150800 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 | |||| | |||| |||| |||||||||||||| | |||||||| Sbjct 150799 TTCACCCAAGTTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTC 150751 >seq18752 Length=383739 Score = 82.4 bits (90), Expect = 3e-13 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 179 GTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGG 238 ||| || ||| ||||||||||| ||||| |||||| || | | |||||| | ||| || Sbjct 135418 GTTCGAGTGGTATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGG 135477 Query 239 TTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291 ||| | ||| ||| || | |||| |||||| |||| ||||||||||||| Sbjct 135478 TTCTGACCTTCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCA 135530 >seq133997 Length=759 Score = 78.8 bits (86), Expect = 3e-12 Identities = 78/101 (77%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 || || ||||||||| |||||||| |||| | | | |||||| ||||| |||||||||| Sbjct 627 GGAGTTCTTTTCACCCTTCCCTCATGGTATTATTTCACTATCGATCACCCAGGAGTATTT 686 Query 559 AGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||| |||||||| | ||||| ||||| ||| || Sbjct 687 AGCCTTGCAAGGTGGTCCTTGCTGATTCGCACGAGATTCCA 727 >seq338599 Length=281 Score = 75.2 bits (82), Expect = 4e-11 Identities = 72/91 (79%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 56 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 115 Query 197 CCCT-ATCCACAGGTCATCCCCTCAGTTTTC 226 |||| | ||||| |||||| || | | ||| Sbjct 116 CCCTAAACCACAACTCATCCGCTGATTCTTC 146 >seq15657 Length=76188 Score = 75.2 bits (82), Expect = 4e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||||||| |||||||| |||| | | | |||||| ||||| |||||||||||| ||| Sbjct 40377 TTTTCACCCTTCCCTCATGGTATTATTTCACTATCGATCACCCAGGAGTATTTAGCCTTG 40318 Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||||||| | ||||| ||||| ||| || Sbjct 40317 CAAGGTGGTCCTTGCTGATTCGCACGAGATTCCA 40284 >seq10068 Length=437080 Score = 75.2 bits (82), Expect = 4e-11 Identities = 107/148 (72%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 144 CTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATC 203 || || ||||||||||||||| |||||| | | ||| | |||| ||||| || || | Sbjct 271652 CTCAACGCATTTCGGGGAGAATCAGCTAGCTCTGGGTTACAGTGGCATTTCATCCTTAAC 271711 Query 204 CACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCC 263 ||| |||| | | | | ||||| || ||| ||||||| ||||||| || | |||| Sbjct 271712 TACAACTCATTCGTTGATTCTTCAA-CTCAGTCGGTTCGGACCTCCACTTAGT-TCACCC 271769 Query 264 GCGCTTCAACCTGCCCATGGATAGATCA 291 || ||| ||| |||| |||||||| Sbjct 271770 AAGCATCATCCTTATCATGTATAGATCA 271797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1810297755648