Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq33802 122 2e-25 >seq33802 Length=298597 Score = 122 bits (134), Expect = 2e-25 Identities = 170/236 (72%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 165 TCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCT 224 ||||| ||| |||||||||||||||| | ||||| |||||||||| ||||| |||| Sbjct 15711 TCCTTCACCACCTTGCGGCAGATCTTGGAGATCTCGCGCTCCAGGTTGCGCACGCCGGAC 15770 Query 225 TCGCGGGTGTAGTAGCGGACGATGTCGCGGA-----TCGT-GCCGACTTCAAATTCGATC 278 ||||| ||||||||||| ||||||||||| | || | | | || ||| ||| | Sbjct 15771 TCGCGCGTGTAGTAGCGCACGATGTCGCGCACGGCTTCCTCGGCCACGCCAAGTTC---C 15827 Query 279 TCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATG 338 ||| ||||| ||| || ||| | ||||||||| ||||| | ||||| Sbjct 15828 TCG---GGCTTCAAGCCGTTCGCCTTCAATTGCTTGGGCAGCAGGTATCTCTGCGCGATC 15884 Query 339 TTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 | |||||||| ||||| || || || | ||| ||||||||||| ||||| || Sbjct 15885 GCCAGTTTCTCGTCCTCGGTATAGCCGGGGATGCGGATCACTTCCATGCGGTCGAG 15940 Score = 93.3 bits (102), Expect = 1e-16 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||| | |||| ||||||||||||||||||||| |||||||| |||||| | || |||| Sbjct 15484 CGATGCTGAGCAGCTCGCCGCCCACCTGGGTCCAGGCCAGGCCGGTGACCAGGCCCACTT 15543 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGG 119 | |||| |||| ||||| | ||| ||||||||||||| |||| || ||| Sbjct 15544 CGTTCTGCAGCTCCTTGCGGCCGAAATCGAAGCGGCGCACGCCGAGGTAGTGGTCGAGG 15602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153746104832