Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq4222 190 5e-46 seq14544 163 7e-38 seq321746 96.9 8e-18 seq9032 93.3 1e-16 seq6038 82.4 2e-13 seq12976 77.0 8e-12 >seq4222 Length=193645 Score = 190 bits (210), Expect = 5e-46 Identities = 160/194 (82%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 178885 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 178942 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| | || |||||||||| ||||| Sbjct 178943 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTC 179002 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| ||||||| | || |||||||||||||||| ||||| ||| Sbjct 179003 TGCACCCCTACCTCCTTTATCACTGAGCGATCATTTAGGGGCCTTAGCTGGTGATCCGGG 179062 Query 387 CTGTTTCCCTCTCG 400 |||||||||||||| Sbjct 179063 CTGTTTCCCTCTCG 179076 >seq14544 Length=165192 Score = 163 bits (180), Expect = 7e-38 Identities = 152/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | || ||| |||| || ||| || ||||||| Sbjct 32136 GCTTCGGTGAATCACTTGAGCCCTGATATATTTTCGGTGCCATGGAG---CTAGACCAGT 32080 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 32079 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 32020 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 32019 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 31960 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 31959 GTTTCCCTCTCG 31948 >seq321746 Length=307 Score = 96.9 bits (106), Expect = 8e-18 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 310 AACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCC 369 |||||||||| ||||| ||| | | || |||||| ||||||| | || ||||||||| Sbjct 3 AACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGATCATTTAGGGGCC 62 Query 370 TTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||||||| ||||| ||||||||||||||||| Sbjct 63 TTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 93 >seq9032 Length=430280 Score = 93.3 bits (102), Expect = 1e-16 Identities = 119/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCG-GAATCACTTGACC 265 ||||| ||||||| ||| |||| ||||| | ||| |||| || |||| || || | Sbjct 284651 CCACACCTTCGGCCGATCGCTTA-GCCCCATT-CATCTTCGGTGCAAGAATG-CTCGATC 284595 Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 | ||||||||||| |||||||||||||| || |||||| | || || ||||||| ||||| Sbjct 284594 AATGAGCTATTACACACTCTTTCAAGGAAGGATGCTTCTAGGCAAATCTCCTGGCTGTCT 284535 Query 326 ACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364 ||| || | |||||| || |||| | || |||| Sbjct 284534 TTGCACGTCTAACTCCTTTATCATTGAGCGATCATTTAG 284496 >seq6038 Length=353859 Score = 82.4 bits (90), Expect = 2e-13 Identities = 98/129 (76%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330 |||||||| ||||||||||||| ||| || ||| | | ||| ||||| ||||| || Sbjct 31573 GCTATTACACACTCTTTCAAGGGTGGTTGTTTCTAGGAAAACTTCCTGTCTGTCTCTGC- 31515 Query 331 ACTCCACATCC-TTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTG 389 || | | ||| ||| ||| ||| | || ||| ||| ||||||| ||||||||| || Sbjct 31514 ACCCTGCCTCCTTTTATCACCGAGCGAACATTTA-GGGTTTTAGCTGGTGATCTGGGTTG 31456 Query 390 TTTCCCTCT 398 ||||||||| Sbjct 31455 TTTCCCTCT 31447 >seq12976 Length=474529 Score = 77.0 bits (84), Expect = 8e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 336 ACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCC 395 ||||||||| ||||||| | || ||||||| |||||||| ||||| |||||||||||| Sbjct 456085 ACATCCTTTATCACTGAGCGATCATTTAGGGGTCTTAGCTGGTGATCCGGGCTGTTTCCC 456144 Query 396 TCTCG 400 ||||| Sbjct 456145 TCTCG 456149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1172868968448