Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq938 192 5e-44 seq29890 163 2e-35 >seq938 Length=1173706 Score = 192 bits (212), Expect = 5e-44 Identities = 396/578 (69%), Gaps = 11/578 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 |||||||||| ||||| | |||||| |||||||| ||||| ||||||||||| | Sbjct 1021315 TGTTCCCCATTGAGTACCCTCAGATTTGGGAAATGTACAAGAAGGCCGAAGCTTCCTTTT 1021256 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGC 61182 |||| | |||||||| |||||||| | ||| | ||||||| || | | | | Sbjct 1021255 GGACAGCCGAGGAGGTAGATTTGTCGCAGGACCTCGCCCACTGGGAAGCCCTCACTGC-C 1021197 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 | ||| | |||||||| |||||||| |||| |||||||| || || || || ||||| Sbjct 1021196 GATGAGAAGCATTTCATCAAACATGTTCTGGCCTTCTTTGCTGCCTCCGATGGCATCGTT 1021137 Query 61243 AATGAGAATTTAT-TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 |||||| || ||| | ||| | | | || || || || || |||||||| || Sbjct 1021136 TTGGAGAATCTAGCTGGCAGGTT-CATGAAAGAAGTCCAGGTTTCCGAGGCGCGCGCGTT 1021078 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 ||||| ||||||||||| || ||||| ||||||| |||||||||||| |||| |||| Sbjct 1021077 TTACGGATTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACAGTCTTCTGCTCGA 1021018 Query 61362 TACGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATAC 61420 || ||||||| || ||| || | | | || | ||| || || || || | | Sbjct 1021017 AACATACATCAAAGATTCGGCCGAGAAGAG-TCGCCTCTTCCGAGCTATTGACACAGTCC 1020959 Query 61421 CGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 | ||| || ||| || | |||||| | ||||||| | | | | | | | Sbjct 1020958 CATGCGTGGAGAAGAAGGCCAAGTGGGCCCTACGTTGGATCGACGG---ATCCGAATCTT 1020902 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC-AGTGGATCGTTT 61539 ||| || || | || || ||||| || ||||| |||| ||| ||| | | | Sbjct 1020901 TTGCCGAGCGGCTACTCGCCTTTGCTTGCGTTGAGGGGATATTCTTCTCCGGGAGCTTCT 1020842 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 | ||| || ||||||||||||||||| || || ||||| || | || || ||| ||| Sbjct 1020841 G-CGCCATATTTTGGTTGAAGAAACGCGGCCTCATGCCAGGATTAACTTTTTCCAACGAG 1020783 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 | || || | |||||||| |||| || || || || Sbjct 1020782 CTAATCTCGAGAGACGAGGGTCTGCACTGCGACTTCGC 1020745 >seq29890 Length=111316 Score = 163 bits (180), Expect = 2e-35 Identities = 373/552 (68%), Gaps = 12/552 (2%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || ||||| ||||||||||||| |||||||||||||||||| | || Sbjct 72968 ATGTACAAGAAAGCCGAAGCCTCCTTCTGGACGGCTGAGGAGGTCGATTTGTCCCAGGAT 72909 Query 61156 ATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAA-CATTTCATTAAACATGTGTTGGC 61214 | ||||||| || | | || | | || |||||||| ||||| ||| | || Sbjct 72908 CTCCGACACTGGGA-CGCTCTTACTGCTGACGAGAAGCATTTCATCAAACACGTGCTCGC 72850 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| ||||| ||||| | || || ||| | |||| Sbjct 72849 CTTCTTCGCCGCATCCGACGGCATCGTATTGGAGAACCTTGCGGGCCGATTCATGAAGGA 72790 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 ||| || || |||||||| || ||||||||||| ||||| ||||| ||||| |||| Sbjct 72789 GGTCCAGGTCTCGGAGGCTCGGGCCTTCTACGGCTTTCAGATCGCCATAGAGAACATCCA 72730 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| ||||||||||| | | |||| || ||||||| || ||||| | | Sbjct 72729 CTCCGAGATGTACAGCCTCTTGCTCGAAACTTACATCAAAGATTCCGCGGAGAAGAACCT 72670 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 | ||| | || ||||| || || || | || ||| || | |||||| || Sbjct 72669 GCTCTTCCACGCGATCGAAACCATCCCCTGCATCGAGACGAAGGCCAAGTGGGCCCTCCG 72610 Query 61455 TTGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 |||||| | || ||| | |||| || ||| | |||| || || |||| Sbjct 72609 CTGGATCGAGGGGT----CGGAGTCGTTTGCGGAGCGAATAGTGGCCTTCGCTTGTGTCG 72554 Query 61514 AGGGTGTAT--TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 | ||| ||| ||||| | | | | | || | | || || ||| | || || || || || Sbjct 72553 AAGGTATATTCTTTTCCG-GAAGCTTCTG-CTCCATATTCTGGCTCAAAAAGCGAGGGCT 72496 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGA 61631 ||||| || ||||| ||| || ||||| || || | ||||| || |||| || || Sbjct 72495 AATGCCGGGACTGACTTTCTCGAACGAGTTAATCTCCAGAGACGAAGGGCTGCACTGCGA 72436 Query 61632 TTTTG-CTGTTT 61642 || | |||||| Sbjct 72435 CTTCGCCTGTTT 72424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395621366929280