Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq18284 84.2 3e-11 >seq18284 Length=461728 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||||||||||| |||||| | || || || |||| ||||| || || |||||| Sbjct 27388 GGGATTCTATTCAACCACGAATCACCCCGTAGGGGTGAGAATTTCGTTACCCGGAAGATC 27447 Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTC 162735 | | ||| | || |||| | || || || || | ||| || || || || Sbjct 27448 ACCAGGGCCGTCGGTCGGATTAAGATCGGGCTTCAGAGCAAACTATTCCTCGGTAATCTG 27507 Query 162736 AATGC-CCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCT 162794 | || ||| | ||||||||| |||| ||||| || || || |||||| ||||||| Sbjct 27508 CACGCATCGA-GGGACTGGGGATTCGCCGGCGACTATGTGGAAGCAATGTGGATGATGCT 27566 Query 162795 TCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTG 162832 ||| || ||| |||||| || |||||| | || |||| Sbjct 27567 TCAACAGGAGCAGCCAGGGGACTATGTGGTGGCCACTG 27604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 687986761043520