Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq10836 102 5e-20 seq10713 102 5e-20 seq8308 98.7 6e-19 seq228 84.2 1e-14 >seq10836 Length=77327 Score = 102 bits (112), Expect = 5e-20 Identities = 95/119 (80%), Gaps = 5/119 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||||| ||||||||||| | ||| ||| ||||||| || Sbjct 44346 GAACCCAAAGACTTTAATTTCTTGTAAGGTGCCGGCGGTGTCCAAAAAGTAACATCCACC 44405 Query 61 GATCCCTAG--TCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || | || ||||||| ||||| |||| ||| || ||| |||||||||||||||||| Sbjct 44406 GA---CAAGGATCGGCATCGTTTATGGTTGAGATTAGGACCGTATCTGATCGTCTTCGA 44461 >seq10713 Length=131259 Score = 102 bits (112), Expect = 5e-20 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59 ||| ||||||| ||||||||||| ||||||||||| ||| ||| ||| |||||| | Sbjct 49967 GAATCCAAAGAATTTGATTTCTCATAAGGTGCCGA-CGATGTCCAAAAAGCAACATCCAC 50025 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||| ||| |||| |||| ||| || ||| ||||||||||||||||| Sbjct 50026 CGATGCCTAGTCAACATCATTTATGGTTGAGATTAGGACAATATCTGATCGTCTTCGA 50083 >seq8308 Length=1952 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 1226 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1167 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| | |||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 1166 CATCGCCGGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1110 >seq228 Length=64338 Score = 84.2 bits (92), Expect = 1e-14 Identities = 87/113 (77%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 || ||||||||||||||||||| |||| |||||| | ||| ||| || ||| || Sbjct 44842 AATCCAAAGACTTTGATTTCTCATAAGATGCCGACGGTGTCCAAAAAGCAATATCCGTCG 44901 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 || | | || | ||| ||||| |||| |||||| || ||||| |||||||||| Sbjct 44902 AT-CATGGTTGACATCGTTTATGGTTGAGACTAGGATGGTATTTGATCGTCTT 44953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278366819070