Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30]
12,713 sequences; 263,787,800 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq8135 161 2e-37
seq10465 114 3e-23
seq10714 98.7 2e-18
seq4877 91.5 3e-16
seq11397 84.2 4e-14
>seq8135
Length=28994
Score = 161 bits (178), Expect = 2e-37
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| ||||||||||
Sbjct 27347 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGATAACGGAGGC 27406
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| ||||| | |||| | ||| ||| | | |||||||||||| ||||| |
Sbjct 27407 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGTCCTCGAGTGCAAAGGCAGAAGGGAG 27466
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|||||||| | ||| | ||| |||||||||||||||||| |||| |||||||| ||
Sbjct 27467 CTTGACTGCAAGACCGACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGGAAGT 27526
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| || ||||| ||||||||||| ||||||||||| || || ||||||
Sbjct 27527 GCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTAACTCTAGGGATA 27575
>seq10465
Length=122346
Score = 114 bits (126), Expect = 3e-23
Identities = 78/88 (89%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 252 TCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGC 311
|| |||||||||||||||||| |||| |||||||||||||| || ||||| |||||||||
Sbjct 70651 TCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGGCGGTGCCGAGTGGAAGGGCCGTCGC 70710
Query 312 TCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||||||||| ||| || ||||||
Sbjct 70711 TCAACGGATAAAAGTTACTCTAGGGATA 70738
>seq10714
Length=74264
Score = 98.7 bits (108), Expect = 2e-18
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | |||| ||| | ||| | | ||| ||||||||||||
Sbjct 43007 AGTGCAAAGGCAGAAGGGAGCTTGATTGCAAGACCGACCCATTGAGCTGGGACGAAAGTC 42948
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| ||||||| || ||| || | || |||| |||||| ||||||||| |||
Sbjct 42947 GGCCTTAGTGATCCGACGATGCCGAGTTAAAGGGCCTTCGCTCATTGGATAAAAGTTACT 42888
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 42887 CTAGGGATA 42879
>seq4877
Length=394
Score = 91.5 bits (100), Expect = 3e-16
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||||||| | ||| | ||| ||||||||||||| |||| |||| |||| || |||||
Sbjct 391 TTGACTGCAAGACCGACCCGTCGAGCAGGGACGAAAATCGGCCTTAGTGATACGACGGTG 332
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | ||||| | || |||||| ||| ||||||| ||| || ||||||
Sbjct 331 CCAAGTGGAAGGACCATCGCTCAACGCATAAAAGTTACTCTAGGGATA 284
>seq11397
Length=231343
Score = 84.2 bits (92), Expect = 4e-14
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310
||| ||||||||||||| |||| |||| |||| || |||||| | ||||| | || |||
Sbjct 109040 GTCAAGCAGGGACGAAAATCGGCCTTAGTGATACGACGGTGCCAAGTGGAAGGACCATCG 109099
Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339
||| ||| ||||||| ||| || ||||||
Sbjct 109100 CTCAACGCATAAAAGTTACTCTAGGGATA 109128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982275107488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |