Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq104964 129 3e-28 seq99948 129 3e-28 seq44579 129 3e-28 >seq104964 Length=6910 Score = 129 bits (142), Expect = 3e-28 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGT-CAAAATGATAACATCGC 58 ||||||||| ||||||||||||| ||||||||| ||| |||| | |||| ||||||| Sbjct 4922 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTTAATG-TAACATCTG 4979 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 4980 CTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 5038 >seq99948 Length=7592 Score = 129 bits (142), Expect = 3e-28 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAA-AATGATAACATCGC 58 ||||||||| ||||||||||||| ||||||||| ||| ||||| |||| ||||||| Sbjct 1989 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTTAATG-TAACATCTG 1932 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1931 CTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1873 >seq44579 Length=9620 Score = 129 bits (142), Expect = 3e-28 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGT-CAAAATGATAACATCGC 58 ||||||||| ||||||||||||| ||||||||| ||| |||| | |||| ||||||| Sbjct 7828 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTTAATG-TAACATCTG 7885 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 7886 CTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 7944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278120730000