Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq104964 77.0 4e-12 seq99948 77.0 4e-12 seq44579 77.0 4e-12 >seq104964 Length=6910 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| || ||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 5189 CCAACAGAACAGGATCGAAA-TCCTATCATGTTATCCCATGCTAATGTATCCAGAGCGTA 5247 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 5248 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 5286 >seq99948 Length=7592 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| || ||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1722 CCAACAGAACAGGATCGAAA-TCCTATCATGTTATCCCATGCTAATGTATCCAGAGCGTA 1664 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 1663 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 1625 >seq44579 Length=9620 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| || ||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 8095 CCAACAGAACAGGATCGAAA-TCCTATCATGTTATCCCATGCTAATGTATCCAGAGCGTA 8153 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 8154 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 8192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594583038000