Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq103237 75.2 1e-11 seq103234 75.2 1e-11 seq94650 75.2 1e-11 seq93253 75.2 1e-11 seq72697 75.2 1e-11 seq68918 75.2 1e-11 seq60565 75.2 1e-11 seq39552 75.2 1e-11 seq30513 75.2 1e-11 seq29319 75.2 1e-11 seq28687 75.2 1e-11 seq19614 75.2 1e-11 seq19609 75.2 1e-11 seq19582 75.2 1e-11 seq19529 75.2 1e-11 seq19522 75.2 1e-11 seq19023 75.2 1e-11 seq9981 75.2 1e-11 seq9917 75.2 1e-11 >seq103237 Length=59913 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq103234 Length=47758 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq94650 Length=61863 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 45281 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 45340 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 45341 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 45389 >seq93253 Length=45449 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq72697 Length=27385 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq68918 Length=72676 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 24819 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 24760 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 24759 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 24711 >seq60565 Length=61769 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 13912 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 13853 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 13852 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 13804 >seq39552 Length=35678 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq30513 Length=43167 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq29319 Length=25926 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq28687 Length=62927 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 15070 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 15011 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 15010 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 14962 >seq19614 Length=67064 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq19609 Length=64440 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq19582 Length=34743 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq19529 Length=81754 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 33897 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 33838 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 33837 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 33789 >seq19522 Length=41314 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq19023 Length=74859 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 16583 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 16524 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 16523 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 16475 >seq9981 Length=65810 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 47858 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 47917 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 47918 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 47966 >seq9917 Length=75921 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 28066 GTTGAGCGAGAGCCCTTCCACACGGTACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 28007 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 28006 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 27958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473109084000