Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02]
2,212 sequences; 322,166,964 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq2212 201 3e-49
seq1969 197 4e-48
seq1942 122 2e-25
seq528 120 8e-25
>seq2212
Length=525671
Score = 201 bits (222), Expect = 3e-49
Identities = 247/334 (74%), Gaps = 10/334 (3%)
Strand=Plus/Minus
Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67
|| ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| |
Sbjct 464193 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 464134
Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124
|| ||||||| ||||||||||||| | || ||||||| | | || || |||
Sbjct 464133 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 464077
Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183
|| | | | || |||| | | ||| | | || ||| ||||| | |||||
Sbjct 464076 AAGTCGC---CAAAAACTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 464020
Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243
| | |||||||| | |||||| ||||||| || |||| | | |||||| |||| ||
Sbjct 464019 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGC 463960
Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303
||||||||| | ||||| || |||||| | ||||||| |||||||| ||||||
Sbjct 463959 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGG 463900
Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
||||||||||||||||||||| ||| ||||||||
Sbjct 463899 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 463866
Score = 125 bits (138), Expect = 2e-26
Identities = 111/139 (80%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| ||| ||||||||| ||||||||| ||||||||||||||||||| || ||| |||
Sbjct 119289 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 119230
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | | |||| | | ||
Sbjct 119229 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 119170
Query 123 GAAATCCCCGGGCTTAACC 141
||||||| ||||| ||||
Sbjct 119169 CAAATCCCAGGGCTCAACC 119151
Score = 118 bits (130), Expect = 3e-24
Identities = 160/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||
Sbjct 6796 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 6737
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| | ||||| |||||||| || | |||||| | |||| || || ||||||||
Sbjct 6736 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAACTAGGGGGGCGAATGGGATTAGA 6677
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368
||||| ||||||| ||| |||||||| ||||| | || | | | || ||
Sbjct 6676 TACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGC 6617
Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| ||||||||||||| |||| ||||||||||| |||
Sbjct 6616 AGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 6575
Score = 118 bits (130), Expect = 3e-24
Identities = 160/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||
Sbjct 225424 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 225483
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| | ||||| |||||||| || | |||||| | |||| || || ||||||||
Sbjct 225484 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAACTAGGGGGGCGAATGGGATTAGA 225543
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368
||||| ||||||| ||| |||||||| ||||| | || | | | || ||
Sbjct 225544 TACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGC 225603
Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| ||||||||||||| |||| ||||||||||| |||
Sbjct 225604 AGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 225645
>seq1969
Length=1425041
Score = 197 bits (218), Expect = 4e-48
Identities = 241/329 (73%), Gaps = 0/329 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| ||| ||||||||| ||||||||| ||||||||||||||||||| || ||| |||
Sbjct 1424713 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 1424772
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | | |||| | | ||
Sbjct 1424773 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 1424832
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
||||||| ||||| |||| ||| || | | ||| | || |||| | ||
Sbjct 1424833 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 1424892
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
|| | |||||| | || ||| |||||||||||||| || | | ||||||||| ||
Sbjct 1424893 GGCAGAGGGAATTTCCGGTAGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 1424952
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
|||| ||| | ||||| |||||||| || | |||||||| ||||||| || |
Sbjct 1424953 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 1425012
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTA 331
|||||||||||| ||||||| ||| ||
Sbjct 1425013 GATTAGATACCCCAGTAGTCCTAGCCGTA 1425041
>seq1942
Length=1573146
Score = 122 bits (134), Expect = 2e-25
Identities = 204/294 (69%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 44 GCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGC 103
||||||| | | ||| |||||| |||| |||||| | |||||||| | ||| | |||
Sbjct 1175287 GCGGTAAGATGGAGGATGCAAGTGTTATCCGGAATGATTGGGCGTACAACGTCTGTAGGT 1175346
Query 104 GGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGC 163
|| | | |||| | | | ||||||| ||||| |||| ||| || | ||| |
Sbjct 1175347 GGCTTTTTAAGTCCGTCATCAAATCCCAGGGCTCAACCCTGGACAGGCGGTAAAAACTAC 1175406
Query 164 ACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATA 223
|| |||| | || || | |||||| ||| ||| |||||||| | ||| |
Sbjct 1175407 CAAGCTGGAGTATAGTAGGGGTAGAGGGAATTTATGGTGGAGCGGTGAAATGTGCAGAGA 1175466
Query 224 TGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGA 283
| | | ||||||||| |||||| ||| ||||| | |||||| || | ||||
Sbjct 1175467 TTGGAAAGAACACCAACGGCGAAAGCACTTTGCTGGGCCGAGACTGACACTGAGAGACGA 1175526
Query 284 AAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
||||| ||||||| || ||||||||||||| ||||||| ||| ||||||||
Sbjct 1175527 AAGCGAGGGGAGCGAATGGGATTAGATACCC-AGTAGTCCTAGCCATAAACGAT 1175579
>seq528
Length=404557
Score = 120 bits (132), Expect = 8e-25
Identities = 259/379 (68%), Gaps = 15/379 (4%)
Strand=Plus/Plus
Query 39 CAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCG 98
|||| ||||||| | ||| |||||| |||| |||||| | |||||||| | |||
Sbjct 134705 CAGCTGCGGTAAGATAGAGGATGCAAGTGTTATCCGGAATGATTGGGCGTACAACGTCTT 134764
Query 99 CAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG 158
||| || | | |||| | | | ||||||| ||||| |||| ||| || |
Sbjct 134765 TAGGTGGCTTTTTAAGTCCGTCATCAAATCCCAGGGCTCAACCCTGGACAGGCGGTAAAA 134824
Query 159 ACTGCACGACTAGAGTGTGTCAG-AGGGG--GGTGGAATTCCACGTGTAGCAGTGAAATG 215
||| | | |||| ||| ||||| | |||||| ||| ||| ||||||||
Sbjct 134825 ACTACCATGTTGGAGTA---CAGTAGGGGTAGAGGGAATTTATGGTGGAGCGGTGAAATG 134881
Query 216 CGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTC 275
|| ||| || | ||||||||||| |||||| ||| ||||| | |||||| ||
Sbjct 134882 CGCAGAGATTGGAAGGAACACCAACGGCGAAAGCACTTTGCTGGGCCGAGACTGACACTG 134941
Query 276 ATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACG 335
| |||||||| ||||||| || ||||||||||||| ||||||| ||| ||||||
Sbjct 134942 AGAGACGAAAGCAAGGGGAGCGAATGGGATTAGATACCC-AGTAGTCCTAGCCGTAAACG 135000
Query 336 ATATCAACTAG---TTGTTGGGGATTTACTTCCTTG--GTAACGTAGCTAACGCGTGAAG 390
|| ||||| || || | || || || || || ||||||||||||| |||
Sbjct 135001 ATGGATACTAGGCACTG-TGCGTATCGAC--CCGTGCAGTGTTGTAGCTAACGCGTTAAG 135057
Query 391 TTGACCGCCTGGGGAATAC 409
| |||||| |||| |||
Sbjct 135058 TATCCCGCCTTGGGAGTAC 135076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289571474048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |