Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02]
2,212 sequences; 322,166,964 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq1969 168 1e-39
seq2212 132 1e-28
seq941 105 1e-20
seq730 77.0 6e-12
>seq1969
Length=1425041
Score = 168 bits (186), Expect = 1e-39
Identities = 134/160 (84%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||| ||||
Sbjct 1424651 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCC-GTAG 1424593
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 1424592 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1424533
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
| ||| |||||| |||||| ||||||||||| ||||||
Sbjct 1424532 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 1424493
>seq2212
Length=525671
Score = 132 bits (146), Expect = 1e-28
Identities = 121/153 (79%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| ||||||
Sbjct 464268 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 464327
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | || || || || |||| ||| | ||
Sbjct 464328 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCGAAAAGACCAGCTAAGCATCATTGG 464387
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 464388 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 464420
>seq941
Length=178831
Score = 105 bits (116), Expect = 1e-20
Identities = 121/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
|||| |||| ||||| ||||| |||||||| ||||||| | ||||| ||| | ||
Sbjct 106332 TCAGACTTTCGTTCATTGCAGAATATTCCCCACTGATGCCTCCTGAAGGAGACTGAGTCG 106391
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||| ||||| ||||| | ||| ||||||| | ||||| ||| || ||| ||
Sbjct 106392 TGTCTCAATCCCAGTGTGGTTGATCATTCTCTCAGACAAGCTACTGATTATCATCTTAGT 106451
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|||||| ||||||||||| ||||| | || ||||| ||
Sbjct 106452 AAGCTATTGCCTCACCAACTAGCTAATGAGATGCAAGCCCCTC 106494
>seq730
Length=252822
Score = 77.0 bits (84), Expect = 6e-12
Identities = 106/147 (72%), Gaps = 6/147 (4%)
Strand=Plus/Minus
Query 34 AATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCC 93
|| || |||| |||||| | || | |||||||||| ||| |||| |||||| ||||||
Sbjct 153655 AAAATTCCCCTTTGCTGCTTTCCATTGGAGTCTGGGTCGTATCTCGGTCCCAGTGTGGCT 153596
Query 94 GTTCAACC-----TCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACC 148
| ||| || |||| | | ||||| ||| || || || |||||| ||||||
Sbjct 153595 GATCATCCGATCCTCTCGGACTAGCTACA-ATCTTCACTTTAGTAAGCTATTGCCTCACC 153537
Query 149 AACTACCTAATCGGCCGCGAGCCCATC 175
||||| |||||| | | | ||||| ||
Sbjct 153536 AACTATCTAATCAGACCCAAGCCCCTC 153510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998377915392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |