Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq2212 82.4 5e-14 seq2143 82.4 5e-14 >seq2212 Length=525671 Score = 82.4 bits (90), Expect = 5e-14 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 4 CTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTT 63 |||||||||||||||||| ||||||| || || || |||||||||| | || ||| Sbjct 153664 CTTTTATCCGTTGAGCGACGGCCCTTTCACTCGGCACCGTCGGATCACTAAGGCCGACTT 153723 Query 64 TCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 153724 TCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 153778 >seq2143 Length=1161279 Score = 82.4 bits (90), Expect = 5e-14 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 6 TTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTC 65 |||||||||||||||| |||||||||| || || |||||||||| | || ||||| Sbjct 964634 TTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTC 964693 Query 66 GCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 | |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 964694 GTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 964746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351992700400