Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq504 190 2e-43 seq20 185 7e-42 >seq504 Length=2204878 Score = 190 bits (210), Expect = 2e-43 Identities = 390/575 (68%), Gaps = 5/575 (1%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| || ||||| || || ||| |||||||| || || |||| ||||||| Sbjct 1298130 TGTTCCCGATTCAGTATCCTGAAATCTGGGAGATGTACAAGAAAGCCCAAGCCTCCTTCT 1298071 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||| | ||||| |||||||||||| | ||| | |||||| | || || Sbjct 1298070 GGACCGCCGAGGAAGTCGATTTGTCCGACGACCTCCGCCACTGGGTAACCCTCTCCTCCG 1298011 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 | || || |||||||| ||||| || | || ||||| ||||| || ||||| ||||| Sbjct 1298010 GCGAGCAGCATTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTTT 1297951 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 |||||| | | ||||||| | |||| || || | || ||||| || |||| Sbjct 1297950 TGGAGAATCTCGCCGGACGTTTCATGAAGGACGTCCAGATCTCAGAGGCCCGCGCCTTCT 1297891 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATA 61363 |||||||||| || ||||| ||||| ||||||| |||||||||||| | ||| |||| Sbjct 1297890 ACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCCTCGAGG 1297831 Query 61364 CGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCG 61422 | ||||||| ||| | ||| | |||| | | ||| || ||||| || | || Sbjct 1297830 CTTACATCAAGGACTCGTCGG-AGAAGAACCACCTCTTCCGCGCAATCGAAACTGTCCCC 1297772 Query 61423 GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT 61482 || || ||| || ||||||| || ||||| | | | || | |||| Sbjct 1297771 TGCGTCCAGAAGAAGGCCAATTGGGCGCTCCGCTGGATTGACGG--CTCCGAAT-CATTC 1297715 Query 61483 GGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCC 61542 | || ||| | | || || || || ||||| |||| ||| ||| || | Sbjct 1297714 GCAGAGCGAATTGTCGCCTTCGCCTGCGTGGAGGGAATATTCTTCTCCGGAAGCTTCTGC 1297655 Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 || ||||| ||| ||||||| || || || ||||| || |||| ||| || ||||| Sbjct 1297654 GCCATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGTTGACTTTCTCGAACGAGTTA 1297595 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || || ||||||||||| |||| || ||||| || Sbjct 1297594 ATTTCTCGCGACGAGGGTTTGCACTGCGATTTCGC 1297560 >seq20 Length=956477 Score = 185 bits (204), Expect = 7e-42 Identities = 378/556 (68%), Gaps = 13/556 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| |||||||||||||| ||||| ||||||||||| | ||||| ||||||||| Sbjct 871296 ATTTGGGAGATGTACAAAAAGGCCGAAGCCTCCTTCTGGACCGCCGAGGAAGTCGATTTG 871237 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 ||| | ||| | ||||||| |||| | || || | |||||||| ||||| Sbjct 871236 TCCCAGGACCTCCGCCACTGGGAAACCCTATCCACCGACGAGAAGCATTTCATCAAACAC 871177 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || |||| ||||| ||||| || ||||| |||||| || || || | ||| ||| Sbjct 871176 GTTCTGGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAAAACCTAGCCGGACGCTTC 871117 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | |||||||||| | ||||| || || |||||||| |||||||| || || || Sbjct 871116 ATGAAGGAGGTGCAGATCTCGGAAGCCCGCGCCTTCTACGGTTTCCAGATCGCAATCGAA 871057 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCG-G 61384 || | ||||| ||||||||||| | ||| |||| | ||||| | ||| | | || | Sbjct 871056 AACATACACTCCGAGATGTACAGCCTCCTCCTCGAATCCTACATAAAGGATTCCGACGAG 870997 Query 61385 AACGTGAAC-GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 || |||| | | ||| || |||||||| | || ||| || |||| || || Sbjct 870996 AA---GAACAGGCTCTTCCGCGCAATCGAGACCGTCCCCTGCGTGGAGAGGAAGGCCAAT 870940 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTGGCAT 61501 ||||| || |||||| || |||| | || | || || | | || | Sbjct 870939 TGGGCACTCCGCTGGATC-----GACGGCGGCGAGTGTTTCGCCGAGCGGATAATCGCGT 870885 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || || || || |||| ||| ||| || ||| || || ||| |||||| Sbjct 870884 TCGCCTGCGTGGAAGGGATATTCTTCTCCGGAAGCTTCTGCGCCATATTCTGGCTGAAGA 870825 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || || || ||||| || |||| ||| || ||||||||||| || ||||| || Sbjct 870824 AGCGCGGTCTGATGCCGGGGTTGACTTTCTCGAACGAGTTGATATCGCGTGACGAAGGTC 870765 Query 61622 TGCATTGTGATTTTGC 61637 |||| || ||||| || Sbjct 870764 TGCACTGCGATTTCGC 870749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557282063680