Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq111809 109 1e-21 seq103716 109 1e-21 seq109372 100 7e-19 seq124172 91.5 4e-16 seq115147 82.4 2e-13 seq115048 82.4 2e-13 seq103084 82.4 2e-13 >seq111809 Length=12013 Score = 109 bits (120), Expect = 1e-21 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 32 GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAA 91 |||||||||||||||||||||| ||| ||||||||||| |||||| | |||||||||| Sbjct 9943 GTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAA 10002 Query 92 GCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||| | ||| || | |||||| | | || ||||||| ||||| |||| Sbjct 10003 GCGTCTGTAGGTGGCTTTGTAAGTCCGCCGTCAAATCCCAGGGCTCAACC 10052 >seq103716 Length=6833 Score = 109 bits (120), Expect = 1e-21 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| || Sbjct 30 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 89 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||||| || | ||||||| ||||||| || |||||||| Sbjct 90 ACTCTGCTGGGCCGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGGGATTAGA 149 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| ||||||| ||| |||||||| Sbjct 150 TACCCCAGTAGTCCTAGCCGTAAACGAT 177 >seq109372 Length=11164 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| |||||||| |||||||||||||| ||||||| ||| ||| Sbjct 2006 TATCTGGGGAATAAGCATTGGCTAACTCTGTGCCAGCAGCCGCAGTAATACAGAGGATGC 1947 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 |||||||| |||||| | |||||||||||||| Sbjct 1946 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGT 1914 >seq124172 Length=9616 Score = 91.5 bits (100), Expect = 4e-16 Identities = 113/154 (73%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 192 AATTCCAC--GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||| | || | | |||||||||||||||| || Sbjct 2791 AATTCCTCCGGTGGAGCGGTGAAATGCGTAAAGATCGGAAAGAACACCAATGGCGAAAGC 2850 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCA------CGAAAGCGTGGGGAGCAAACAGG 303 | | || || |||||||| || | | ||||||| ||||||| || || Sbjct 2851 ACTCTGCTAGGCCGACACTGACACTGACACTGAGAGGCGAAAGCTAGGGGAGCGAATGGG 2910 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||| ||||||| ||| |||||||| Sbjct 2911 ATTAGATACCCCAGTAGTCCTAGCCGTAAACGAT 2944 >seq115147 Length=8160 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 13 ATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAAT 72 ||||||| ||||||||| |||||||||||||| |||||| ||| | ||||||||| | Sbjct 269 ATAAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATT 210 Query 73 CGGAATTACTGGGCGTAAAGCGT 95 ||||| | | ||||||||| || Sbjct 209 TGGAATGATTTGGCGTAAAGTGT 187 >seq115048 Length=6719 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 13 ATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAAT 72 ||||||| ||||||||| |||||||||||||| |||||| ||| | ||||||||| | Sbjct 6451 ATAAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATT 6510 Query 73 CGGAATTACTGGGCGTAAAGCGT 95 ||||| | | ||||||||| || Sbjct 6511 TGGAATGATTTGGCGTAAAGTGT 6533 >seq103084 Length=15254 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 13 ATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAAT 72 ||||||| ||||||||| |||||||||||||| |||||| ||| | ||||||||| | Sbjct 479 ATAAGCATCGGCTAACTCAATGCCAGCAGCCGCGATAATACAGAGGATACAAGCGTTATT 538 Query 73 CGGAATTACTGGGCGTAAAGCGT 95 ||||| | | ||||||||| || Sbjct 539 TGGAATGATTTGGCGTAAAGTGT 561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1286066483104