Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucalyptus_20camaldulensis_20[genbank_20GCA_5F000260855.1_202012-01- 23] 274,001 sequences; 654,922,307 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq3532 78.8 9e-13 seq118271 77.0 3e-12 >seq3532 Length=3298 Score = 78.8 bits (86), Expect = 9e-13 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| ||||||||||| || ||| || || ||| | || Sbjct 2420 ACCAGGCCTGGGCGACTGTTTACTAAAAACACAGGTCTTTGCCAAATCGTAAGACCATGT 2479 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || || |||||||||||| |||||||||||| || Sbjct 2480 ATGGGAGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2515 >seq118271 Length=2743 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||| ||||| || ||| | |||| ||| ||| Sbjct 2561 GCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGTTGA 2620 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 2621 CGCCTGCCCAGTGCCGGAAGGTCAA 2645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475534389381